Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.231-201ENST00000364358 102 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 RNU6-417P-201ENST00000384712 107 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MIR515-2-201ENST00000384883 83 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MIR515-1-201ENST00000384884 83 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 RNU6-57P-201ENST00000411348 103 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC004965.1-201ENST00000413033 213 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 COX6CP10-201ENST00000416832 224 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 RPS23P4-201ENST00000487908 423 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC108210.2-201ENST00000503681 201 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MTND1P35-201ENST00000526739 508 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AL442163.3-201ENST00000554110 156 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC136932.1-201ENST00000574771 208 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MIR4709-201ENST00000577272 72 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MTND1P15-201ENST00000579262 949 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 SNRPGP20-201ENST00000604477 205 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AL365434.2-201ENST00000607979 234 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AL133215.3-201ENST00000609801 448 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AL353997.5-201ENST00000618886 171 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.95□□□□□ -2.26
LRRC42Q9Y546 AC097520.1-201ENST00000624435 385 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 MIR6863-201ENST00000636112 90 ntBASIC0.95□□□□□ -2.26
LRRC42Q9Y546 SNORD113-7-201ENST00000363762 77 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.481-201ENST00000384373 102 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNU4-62P-201ENST00000410125 130 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNA5SP504-201ENST00000410676 117 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC42Q9Y546 DYNLT3P2-201ENST00000442517 295 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNU7-95P-201ENST00000459222 64 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RPL23AP75-201ENST00000491601 451 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNU6-1146P-201ENST00000516282 102 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNU6-405P-201ENST00000516637 110 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC42Q9Y546 CYP3A52P-201ENST00000563326 91 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AC004492.1-201ENST00000607036 742 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AC073534.2-201ENST00000620377 381 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 AC099654.5-201ENST00000636479 350 ntBASIC0.94□□□□□ -2.26
LRRC42Q9Y546 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 ZNF204P-201ENST00000416749 2397 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 SNORD50.1-201ENST00000362987 71 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU6-1085P-201ENST00000363576 107 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU6-933P-201ENST00000384424 107 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNA5SP109-201ENST00000391010 116 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNA5SP467-201ENST00000391274 118 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AF228730.1-201ENST00000397972 663 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 CALM2P3-201ENST00000400429 449 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU2-66P-201ENST00000410650 161 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AL606517.2-201ENST00000442855 241 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC074290.1-201ENST00000448883 135 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RPS27P1-201ENST00000450552 247 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC079354.2-201ENST00000453523 154 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU7-187P-201ENST00000458985 68 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU7-34P-201ENST00000459394 64 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU7-57P-201ENST00000459540 60 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC083904.1-201ENST00000487828 231 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 HMGN1P12-201ENST00000499125 195 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU6-344P-201ENST00000516635 111 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 MTND1P5-201ENST00000517906 940 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC024995.1-201ENST00000523014 93 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC016957.1-201ENST00000534895 309 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AL512310.8-201ENST00000550183 120 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNU6-89P-201ENST00000606519 100 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AL158209.2-201ENST00000619266 216 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 MIR8065-201ENST00000620577 100 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AL359880.1-201ENST00000621879 266 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AC009033.1-201ENST00000624279 431 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 AL078596.1-201ENST00000624856 447 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 snoZ196.1-201ENST00000625269 89 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 U6.108-201ENST00000637764 58 ntBASIC0.93□□□□□ -2.26
LRRC42Q9Y546 RNA5SP213-201ENST00000391031 106 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 MTCO3P40-201ENST00000392516 676 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 RPL21P1-201ENST00000399532 476 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 SNORA11.2-201ENST00000408318 127 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 RNU6-1068P-201ENST00000410958 103 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 MTATP6P17-201ENST00000431030 672 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 ERLEC1P1-201ENST00000433806 578 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.92□□□□□ -2.26
LRRC42Q9Y546 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.92□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.688-201ENST00000516565 95 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 Y_RNA.693-201ENST00000516641 110 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 RNU1-117P-201ENST00000517041 158 ntBASIC0.92□□□□□ -2.26
LRRC42Q9Y546 AC025647.1-201ENST00000517879 253 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms