Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 Y_RNA.436-201ENST00000384097 102 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-417P-201ENST00000384712 107 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA16.2-201ENST00000390991 127 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 SNORD70.1-201ENST00000391007 85 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 MTCYBP8-201ENST00000422855 651 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 DLGAP5P1-201ENST00000430307 464 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RPS29P29-201ENST00000456396 171 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 SNRPFP3-201ENST00000457792 225 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNU7-180P-201ENST00000459240 63 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 SRRM1P2-201ENST00000464531 1192 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC004223.1-201ENST00000479840 271 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA40.12-201ENST00000516329 111 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNA5SP168-201ENST00000516642 112 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNU1-92P-201ENST00000517017 135 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC104383.1-201ENST00000530297 370 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 HIF1AP1-201ENST00000553642 175 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 MIR5006-201ENST00000583027 110 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 MIR4424-201ENST00000585257 86 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AL354950.2-201ENST00000617939 290 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC006001.4-201ENST00000622243 395 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 AC124864.2-201ENST00000624736 186 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 OR5AK4P-201ENST00000635912 903 ntBASIC0.8□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-623P-201ENST00000363143 105 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.140-201ENST00000363474 103 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1322P-201ENST00000364309 107 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNU4-75P-201ENST00000364621 146 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.318-201ENST00000365131 97 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-975P-201ENST00000384296 105 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.481-201ENST00000384373 102 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1031P-201ENST00000384773 107 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNA5SP109-201ENST00000391010 116 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MTCO3P40-201ENST00000392516 676 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 CALM2P3-201ENST00000400429 449 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 TIMM9P3-201ENST00000428659 274 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MTND1P1-201ENST00000445453 368 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MTCO2P7-201ENST00000446518 666 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 snoU13.23-201ENST00000458863 104 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AC083798.1-201ENST00000472671 131 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-197P-201ENST00000516680 100 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA25.17-201ENST00000517184 124 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AC004223.2-201ENST00000590309 544 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AC146944.4-201ENST00000602697 718 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AL513534.2-201ENST00000603836 250 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AL353997.5-201ENST00000618886 171 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AL158209.2-201ENST00000619266 216 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AC068792.1-201ENST00000621354 417 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AL359880.1-201ENST00000621879 266 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AC139792.3-201ENST00000623525 224 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 MIR6863-201ENST00000636112 90 ntBASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.79□□□□□ -2.28
CHTOPQ9Y3Y2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-1085P-201ENST00000363576 107 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA33-201ENST00000363664 130 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.381-201ENST00000365666 102 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA69-201ENST00000383895 132 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.409-201ENST00000383990 98 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 U8.10-201ENST00000384260 133 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.517-201ENST00000384551 106 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 SNORD116-4-201ENST00000384733 96 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 MIR549A-201ENST00000385268 96 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU4-62P-201ENST00000410125 130 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC016717.1-201ENST00000448918 286 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU7-167P-201ENST00000459160 62 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-261P-201ENST00000459506 102 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC019235.1-201ENST00000503847 207 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 Y_RNA.693-201ENST00000516641 110 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU1-142P-201ENST00000516682 145 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 RNU6-835P-201ENST00000516974 104 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 MTND4P7-201ENST00000523876 130 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC016256.1-201ENST00000547971 354 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 MIR5583-1-201ENST00000580941 59 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 MIR4524B-201ENST00000581569 115 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC104984.5-201ENST00000586878 94 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC015540.1-201ENST00000615828 501 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 uc_338.34-201ENST00000617467 174 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 SNORA43.4-201ENST00000629559 138 ntBASIC0.78□□□□□ -2.28
CHTOPQ9Y3Y2 AC009541.1-201ENST00000438279 2662 ntBASIC0.78□□□□□ -2.29
CHTOPQ9Y3Y2 Y_RNA.41-201ENST00000362646 102 ntBASIC0.77□□□□□ -2.29
CHTOPQ9Y3Y2 RNU6-82P-201ENST00000363970 107 ntBASIC0.77□□□□□ -2.29
CHTOPQ9Y3Y2 RNU6-266P-201ENST00000364225 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms