Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL117336.2-201ENST00000602435 335 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AP001836.1-201ENST00000604675 523 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AC004832.4-201ENST00000608952 331 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AC009159.2-201ENST00000617603 606 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AL607023.1-201ENST00000620045 248 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AC004808.1-201ENST00000627671 721 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 AL445984.1-201ENST00000637834 659 ntBASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
RNF11Q9Y3C5 RNA5SP264-201ENST00000363115 107 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RNU6-1305P-201ENST00000364353 104 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RNU6-533P-201ENST00000384144 107 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RNU6-1297P-201ENST00000384415 104 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 MIR526A1-201ENST00000384897 85 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 MTND3P17-201ENST00000416968 344 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AC119618.1-201ENST00000434191 222 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RNU7-57P-201ENST00000459540 60 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 OR9P1P-201ENST00000496431 281 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AC025647.1-201ENST00000517879 253 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AC026470.2-201ENST00000561492 181 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 SNRPGP20-201ENST00000604477 205 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RAC1P9-201ENST00000604990 392 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AC002044.1-201ENST00000606707 158 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AC007684.1-201ENST00000609671 477 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AL031667.3-201ENST00000620124 655 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 AL138960.2-201ENST00000625145 535 ntBASIC0.07□□□□□ -2.4
RNF11Q9Y3C5 RNU6-179P-201ENST00000363350 107 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 SNORD114-23-201ENST00000363536 72 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 RNU4-45P-201ENST00000365469 141 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 RNU6-424P-201ENST00000384367 105 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 MIR140-201ENST00000385282 100 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 MIR1185-1-201ENST00000408598 86 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 AL663109.1-201ENST00000411498 844 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 MTATP6P20-201ENST00000414147 562 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 LINC01399-202ENST00000458450 244 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 RNA5SP454-201ENST00000517231 127 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 AC022868.1-201ENST00000517767 391 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 FRG2DP-202ENST00000566967 323 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 MIR98-201ENST00000606724 119 ntBASIC0.06□□□□□ -2.4
RNF11Q9Y3C5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 RNU2-72P-201ENST00000411175 163 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 RPL31P35-201ENST00000431058 377 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 RPL37P21-201ENST00000435890 276 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC104136.1-201ENST00000512969 394 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 RNU6-1116P-201ENST00000517269 99 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 SNORA28-201ENST00000606769 126 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC011155.2-201ENST00000623202 216 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 AC005592.1-201ENST00000566527 1640 ntBASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
RNF11Q9Y3C5 SNORA67.2-201ENST00000384300 149 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC008134.1-201ENST00000420943 193 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 MTCYBP10-201ENST00000424905 650 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 MTCO1P19-201ENST00000443487 500 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC067940.1-201ENST00000458411 300 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC116562.3-201ENST00000506136 177 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 RNU1-117P-201ENST00000517041 158 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 SNORA25.17-201ENST00000517184 124 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC068587.5-201ENST00000528506 175 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 AC068790.2-201ENST00000602601 557 ntBASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
RNF11Q9Y3C5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 MIR103A2-201ENST00000362154 78 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 SNORD44.1-201ENST00000363202 61 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 Y_RNA.122-201ENST00000363331 96 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU6-137P-201ENST00000363680 108 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU6-1105P-201ENST00000384774 107 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNA5SP95-201ENST00000410319 137 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU6-177P-201ENST00000411257 104 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RPS27AP14-201ENST00000422868 454 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC093019.1-201ENST00000443135 252 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC009237.7-201ENST00000447357 229 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 SNRPGP12-201ENST00000449481 213 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU7-94P-201ENST00000459576 63 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 HMGN2P26-201ENST00000463169 339 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC010469.2-201ENST00000496412 480 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC091951.3-201ENST00000504093 246 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AP003716.2-201ENST00000528260 108 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 AC007014.2-201ENST00000615581 479 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
RNF11Q9Y3C5 RNU5F-6P-201ENST00000362979 116 ntBASIC0.02□□□□□ -2.41
RNF11Q9Y3C5 Y_RNA.367-201ENST00000365544 101 ntBASIC0.02□□□□□ -2.41
RNF11Q9Y3C5 MIR598-201ENST00000384868 97 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms