Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MIR5571-201ENST00000577998 113 ntBASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 MIR5739-201ENST00000619803 80 ntBASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 AC130454.1-201ENST00000622948 401 ntBASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 SCARNA4-201ENST00000629045 128 ntBASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
SCAF8Q9UPN6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 RNA5SP240-201ENST00000365355 128 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 Y_RNA.483-201ENST00000384380 101 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 MIR29B2-201ENST00000385055 81 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AL023284.1-201ENST00000403956 276 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 MIR1302-6-201ENST00000408466 90 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AL356320.1-201ENST00000429616 163 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AL445687.1-201ENST00000439946 251 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 GPM6BP3-201ENST00000442797 145 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AC104389.3-201ENST00000445629 235 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 LINC01399-202ENST00000458450 244 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AC010469.2-201ENST00000496412 480 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 AC023157.2-201ENST00000540596 141 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 MIR3117-201ENST00000584034 78 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 RPL30P11-203ENST00000598995 310 ntBASIC2.84□□□□□ -1.95
SCAF8Q9UPN6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
SCAF8Q9UPN6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SCAF8Q9UPN6 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.105-201ENST00000363182 111 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.183-201ENST00000363882 113 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.447-201ENST00000384184 113 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.458-201ENST00000384240 102 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 HMGN2P23-201ENST00000456759 269 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 SNORD127-201ENST00000458892 86 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 RPL23AP70-201ENST00000483361 460 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 HMGB1P35-201ENST00000503360 598 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 AC090617.3-201ENST00000573670 475 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 MIR5194-201ENST00000582634 120 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 MIR6873-201ENST00000622788 63 ntBASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SCAF8Q9UPN6 RNU6-17P-201ENST00000384245 107 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-18P-201ENST00000384527 107 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 MIR218-1-201ENST00000384999 110 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-482P-201ENST00000391068 107 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-121P-201ENST00000410525 99 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-847P-201ENST00000411115 108 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-1132P-201ENST00000459214 107 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AC073901.1-201ENST00000462471 408 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AF186996.7-201ENST00000492781 209 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AC067942.3-201ENST00000512025 362 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 SNORA31.15-201ENST00000516771 132 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-388P-201ENST00000517012 105 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 RNU6-389P-201ENST00000517048 105 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 MIR2355-201ENST00000517199 87 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AP003733.2-201ENST00000529409 171 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AC005357.1-201ENST00000588399 301 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AL670379.2-201ENST00000604983 252 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 SNORA43.4-201ENST00000629559 138 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 SNORD98-201ENST00000636377 67 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 U6.92-201ENST00000636464 89 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AC010615.1-201ENST00000594254 1764 ntBASIC2.82□□□□□ -1.96
SCAF8Q9UPN6 AL356292.1-201ENST00000283110 373 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 RNU6-222P-201ENST00000362438 107 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 RNA5SP456-201ENST00000364002 114 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 SNORD115-32-201ENST00000364079 82 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 SNORA29-201ENST00000384183 140 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.489-201ENST00000384410 101 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 RNY3P4-201ENST00000384428 101 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 MIR32-201ENST00000384965 70 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AL590135.1-201ENST00000422215 156 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC019205.3-201ENST00000424573 156 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 SDAD1P3-201ENST00000427380 333 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC016700.2-201ENST00000446011 156 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC087477.1-201ENST00000465747 340 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 SNRPGP7-201ENST00000469016 106 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC025465.3-201ENST00000510570 311 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 Y_RNA.680-201ENST00000516441 93 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 RNU6-570P-201ENST00000517051 105 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 RN7SKP40-201ENST00000517211 242 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 MIR3923-201ENST00000579521 83 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 MIR3670-2-201ENST00000582974 65 ntBASIC2.81□□□□□ -1.96
SCAF8Q9UPN6 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms