Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP18Q9UMW8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
USP18Q9UMW8 RNU1-72P-201ENST00000362976 153 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 SNORD32B-201ENST00000364460 84 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 Y_RNA.552-201ENST00000384665 112 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 SNORD58.1-201ENST00000391313 66 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC027124.2-201ENST00000428249 105 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC004386.2-201ENST00000441858 148 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 UQCRBP2-201ENST00000447827 297 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 snoU13.26-201ENST00000459452 105 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC107222.1-201ENST00000510899 637 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC079600.2-201ENST00000550076 130 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC055872.1-201ENST00000570978 278 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC010620.2-201ENST00000600135 313 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC008264.2-201ENST00000610193 3731 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 AC010329.5-201ENST00000623497 2174 ntBASIC3.04□□□□□ -1.92
USP18Q9UMW8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
USP18Q9UMW8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 RNU1-35P-201ENST00000362782 153 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 RNU6-1175P-201ENST00000365200 107 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 Y_RNA.352-201ENST00000365439 102 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 MIR29B2-201ENST00000385055 81 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
USP18Q9UMW8 RNU4-30P-201ENST00000410245 143 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC003685.2-201ENST00000422795 395 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 RNU6-625P-201ENST00000459412 107 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 SEM1P1-201ENST00000506694 209 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC107016.2-201ENST00000547968 190 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC005176.2-201ENST00000596933 147 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 AC010900.2-201ENST00000604508 210 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 AL355596.1-201ENST00000565399 3996 ntBASIC3.03□□□□□ -1.92
USP18Q9UMW8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
USP18Q9UMW8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
USP18Q9UMW8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.03□□□□□ -1.93
USP18Q9UMW8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP18Q9UMW8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP18Q9UMW8 MIR410-201ENST00000362222 80 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 SNORA18.2-201ENST00000383865 132 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 Y_RNA.498-201ENST00000384460 102 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 Y_RNA.539-201ENST00000384635 107 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 SNORA12-201ENST00000391162 147 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 AC009237.7-201ENST00000447357 229 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 SERF1AP1-201ENST00000514575 187 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 RNU2-44P-201ENST00000516795 194 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 RNU7-110P-201ENST00000516891 62 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 RPL17P51-201ENST00000605218 238 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 AC022441.3-201ENST00000605737 136 ntBASIC3.02□□□□□ -1.93
USP18Q9UMW8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
USP18Q9UMW8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
USP18Q9UMW8 RNU6-727P-201ENST00000363592 107 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 SNORA51.4-201ENST00000364993 124 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 RNU6-326P-201ENST00000365480 107 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 SNORA67.2-201ENST00000384300 149 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 AL603910.2-201ENST00000407268 136 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 RNA5SP504-201ENST00000410676 117 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 RAB28P5-201ENST00000427490 651 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 AC087499.2-201ENST00000432861 149 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 HMGB3P17-201ENST00000504195 649 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 RNU6-111P-201ENST00000517179 105 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 HSPE1P18-201ENST00000517602 280 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 MIR5006-201ENST00000583027 110 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.01□□□□□ -1.93
USP18Q9UMW8 SNORD11B-201ENST00000607707 90 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 AC090115.4-201ENST00000609970 188 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 MIR7515-201ENST00000637837 67 ntBASIC3.01□□□□□ -1.93
USP18Q9UMW8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
USP18Q9UMW8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3□□□□□ -1.93
USP18Q9UMW8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP18Q9UMW8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP18Q9UMW8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
USP18Q9UMW8 Y_RNA.415-201ENST00000384012 112 ntBASIC3□□□□□ -1.93
USP18Q9UMW8 RNU6-851P-201ENST00000384565 107 ntBASIC3□□□□□ -1.93
USP18Q9UMW8 RNU6-21P-201ENST00000384710 107 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms