Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 Y_RNA.277-201ENST00000364754 102 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.416-201ENST00000384014 113 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 SNORD63-201ENST00000384262 68 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 RNU1-57P-201ENST00000384491 166 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 RNU2-14P-201ENST00000411053 191 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 Z98949.2-201ENST00000440996 144 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 RPL23AP3-201ENST00000453844 468 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AC091179.3-201ENST00000474761 144 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AL121594.1-201ENST00000475906 575 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 RNA5SP54-201ENST00000516951 92 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 PCGEM1.1-201ENST00000613431 131 ntBASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SYNPO2Q9UMS6 MTND5P35-201ENST00000557537 1720 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AL359854.1-201ENST00000614203 1594 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 MIR335-201ENST00000362173 94 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-1210P-201ENST00000363775 107 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.179-201ENST00000363844 90 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-280P-201ENST00000364145 104 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RNA5SP201-201ENST00000410316 124 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AL139109.1-201ENST00000455491 297 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RPS3P1-201ENST00000456781 192 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AC073901.1-201ENST00000462471 408 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RPL31P41-201ENST00000477967 372 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-966P-201ENST00000516479 104 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 MIR4643-201ENST00000577473 78 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AC005520.5-201ENST00000613926 164 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AC141273.2-201ENST00000618989 130 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 AL136360.1-201ENST00000503377 1900 ntBASIC3.14□□□□□ -1.91
SYNPO2Q9UMS6 BX322639.1-202ENST00000423987 2213 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.20-201ENST00000362479 113 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.65-201ENST00000362846 100 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-655P-201ENST00000362858 107 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 SNORD81.1-201ENST00000363064 77 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 SNORA11.2-201ENST00000408318 127 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.595-201ENST00000410403 105 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RNU2-52P-201ENST00000410680 190 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 AC004866.1-201ENST00000411748 78 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 AC145146.1-201ENST00000496370 254 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RPL23AP94-201ENST00000512518 302 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 MRPS36P2-201ENST00000512569 299 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RNU7-110P-201ENST00000516891 62 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 DEFB131C-201ENST00000528817 165 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 MIR4423-201ENST00000580922 80 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SYNPO2Q9UMS6 RNU1-138P-201ENST00000384093 164 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.462-201ENST00000384268 102 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 SNORA12-201ENST00000391162 147 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.683-201ENST00000516508 93 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 AC011373.1-201ENST00000607270 237 ntBASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYNPO2Q9UMS6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-1266P-201ENST00000362794 105 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 RNU5F-3P-201ENST00000363767 117 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 RNU6-1175P-201ENST00000365200 107 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 Y_RNA.478-201ENST00000384358 107 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 MIR196B-201ENST00000384852 84 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 MIR181A2-201ENST00000384863 110 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 RNU5A-5P-201ENST00000411054 116 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 ELOCP21-201ENST00000412558 336 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 AC027124.2-201ENST00000428249 105 ntBASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.11□□□□□ -1.91
SYNPO2Q9UMS6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms