Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AC125232.2-201ENST00000592457 143 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AL713866.2-201ENST00000603579 219 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AC016727.2-201ENST00000603988 621 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AC124312.5-201ENST00000604451 268 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AL162730.1-201ENST00000605734 292 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 AL078596.1-201ENST00000624856 447 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 MIR7157-201ENST00000635801 60 ntBASIC2.3□□□□□ -2.04
SIX4Q9UIU6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SIX4Q9UIU6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 RNA5SP361-201ENST00000362686 118 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 RNU6-26P-201ENST00000383985 107 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 RNU6-318P-201ENST00000384283 103 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 SNORA51.11-201ENST00000384442 131 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 RNU6-159P-201ENST00000391080 106 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AL079342.1-201ENST00000401460 267 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 SNORA11.4-201ENST00000408823 129 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 RNU6-101P-201ENST00000410323 104 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 HMGB3P2-201ENST00000411913 584 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 U8.20-201ENST00000459445 131 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AC090515.1-201ENST00000465295 476 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AC104435.1-201ENST00000483483 166 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AC023141.11-201ENST00000508864 202 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.721-201ENST00000517207 102 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AL442163.3-201ENST00000554110 156 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 MIR4648-201ENST00000580107 72 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 AL670379.2-201ENST00000604983 252 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 MIR6132-201ENST00000622083 109 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 ZNF204P-201ENST00000416749 2397 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX4Q9UIU6 ZNF271P-202ENST00000465539 1970 ntBASIC2.29□□□□□ -2.04
SIX4Q9UIU6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-1301P-201ENST00000362724 104 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-873P-201ENST00000363833 107 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-879P-201ENST00000364328 108 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 U6atac.2-201ENST00000408644 118 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 OOSP1P1-201ENST00000423265 274 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 CR769767.1-201ENST00000436337 346 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 MTCO3P8-201ENST00000453691 755 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AC010469.2-201ENST00000496412 480 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AC093852.1-201ENST00000503587 266 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.715-201ENST00000517082 110 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AC022616.4-201ENST00000522985 181 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 DEFB131C-201ENST00000528817 165 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 AL138963.2-201ENST00000605137 226 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 U6.92-201ENST00000636464 89 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.28□□□□□ -2.04
SIX4Q9UIU6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SIX4Q9UIU6 Y_RNA.27-201ENST00000362540 103 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 SNORA38-201ENST00000363946 132 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 RNU1-52P-201ENST00000384190 164 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 RNU6-1001P-201ENST00000411265 100 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 MTCO3P19-201ENST00000415864 321 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC007215.1-201ENST00000464893 276 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC010655.3-201ENST00000478818 450 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC091144.1-201ENST00000519573 138 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC093023.1-201ENST00000547375 507 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC023824.2-201ENST00000566185 400 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC069294.1-201ENST00000608397 350 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 AC005296.1-201ENST00000616145 209 ntBASIC2.27□□□□□ -2.05
SIX4Q9UIU6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SIX4Q9UIU6 RNU6-1309P-201ENST00000363305 108 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU6-137P-201ENST00000363680 108 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 U3.9-201ENST00000363823 204 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU6-944P-201ENST00000364023 107 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU6-281P-201ENST00000384212 103 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNY3P4-201ENST00000384428 101 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU6-1105P-201ENST00000384774 107 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU6-220P-201ENST00000390919 107 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 MIR548F4-201ENST00000408515 105 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNU2-2P-201ENST00000410396 191 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AC004866.1-201ENST00000411748 78 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AL358176.2-201ENST00000425769 204 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.26□□□□□ -2.05
SIX4Q9UIU6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
SIX4Q9UIU6 RNA5SP54-201ENST00000516951 92 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 MIR2355-201ENST00000517199 87 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 HSPE1P18-201ENST00000517602 280 ntBASIC2.26□□□□□ -2.05
SIX4Q9UIU6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms