Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNORA18.2-201ENST00000383865 132 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 RNU6-38P-201ENST00000384085 107 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 SNORA29-201ENST00000384183 140 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 MIR1283-1-201ENST00000408494 87 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 snoU13.27-201ENST00000459278 104 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 HMGN2P9-201ENST00000476875 229 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.654-201ENST00000497848 106 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 CPDP1-201ENST00000579660 283 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 SNORD114-21-201ENST00000606412 72 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 AC245008.1-201ENST00000608123 476 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 TCL6_2.1-201ENST00000615162 119 ntBASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CTNNA3Q9UI47 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.296-201ENST00000364930 108 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.393-201ENST00000383936 102 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1235P-201ENST00000384559 107 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MIR515-2-201ENST00000384883 83 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MIR515-1-201ENST00000384884 83 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 SNORD73A-201ENST00000386062 65 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1093P-201ENST00000391194 107 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 COX6CP10-201ENST00000416832 224 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MTCO1P20-201ENST00000425366 358 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 AL359672.1-201ENST00000442302 409 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 PGBD4P5-201ENST00000445958 426 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 RNU6-498P-201ENST00000459468 107 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1041P-201ENST00000516254 102 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 RNU6-323P-201ENST00000521915 107 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 AC005562.2-201ENST00000618264 111 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 AC137590.2-201ENST00000619709 240 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 BX322639.1-202ENST00000423987 2213 ntBASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.205-201ENST00000364128 113 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 SNORA72.2-201ENST00000365028 127 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 MTCO1P19-201ENST00000443487 500 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 RNU6-948P-201ENST00000516374 107 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 DEFB131C-201ENST00000528817 165 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 SNORA59B-202ENST00000578183 701 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AC103810.9-201ENST00000606688 112 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AC064836.2-201ENST00000609491 462 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AC073534.2-201ENST00000620377 381 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 AC009033.1-201ENST00000624279 431 ntBASIC1.23□□□□□ -2.21
CTNNA3Q9UI47 ELL2P3-201ENST00000457883 1602 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 Y_RNA.167-201ENST00000363735 109 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 SNORA70.7-201ENST00000384159 133 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 RNU6-784P-201ENST00000384330 106 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 MIR194-1-201ENST00000384892 85 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 MIR514A2-201ENST00000385131 88 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 MIR514A3-201ENST00000385132 88 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 RNU4-55P-201ENST00000410731 137 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC060773.1-201ENST00000421698 310 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC009237.7-201ENST00000447357 229 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC098826.2-201ENST00000452011 651 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 RNU6-1208P-201ENST00000459588 107 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC114982.1-201ENST00000469402 321 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 RPS26P45-201ENST00000471748 340 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC010486.3-201ENST00000511602 785 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC011406.1-201ENST00000512440 370 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AL157687.1-201ENST00000554853 619 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 MIR5692C1-201ENST00000585309 91 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 AC004492.1-201ENST00000607036 742 ntBASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
CTNNA3Q9UI47 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNU6-877P-201ENST00000383868 107 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 SNORA22-201ENST00000383907 134 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNU6-975P-201ENST00000384296 105 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 SNORA22C-201ENST00000384614 134 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNY3P9-201ENST00000384727 106 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNU6-1105P-201ENST00000384774 107 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 EIF4E2P1-201ENST00000393781 255 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 TIMM9P3-201ENST00000428659 274 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AC010424.1-201ENST00000506336 297 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AL512310.8-201ENST00000550183 120 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MIR4753-201ENST00000585119 83 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AL365434.2-201ENST00000607979 234 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 MIR8076-201ENST00000611401 83 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 AC040896.1-201ENST00000613819 479 ntBASIC1.21□□□□□ -2.22
CTNNA3Q9UI47 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms