Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.28□□□□□ -1.88
USP35Q9P2H5 MIR2053-201ENST00000459295 91 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 AC107222.1-201ENST00000510899 637 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 AC091144.1-201ENST00000519573 138 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.28□□□□□ -1.88
USP35Q9P2H5 AC005296.1-201ENST00000616145 209 ntBASIC3.28□□□□□ -1.88
USP35Q9P2H5 ZNF72P-201ENST00000425869 1908 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 RNU6-222P-201ENST00000362438 107 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 RNU6-797P-201ENST00000363101 109 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 RNU6-1164P-201ENST00000364428 107 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC074290.1-201ENST00000448883 135 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.27□□□□□ -1.89
USP35Q9P2H5 RNU6-120P-201ENST00000516077 103 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 RNA5SP458-201ENST00000516188 119 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 CYCSP23-201ENST00000519781 313 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC144568.1-201ENST00000520139 137 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC010999.1-201ENST00000611856 324 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MIR1244-1-201ENST00000612829 85 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MIR1244-3-201ENST00000635744 85 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MIR203B-201ENST00000636080 86 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 AC068205.3-201ENST00000636385 468 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MIR1244-2-201ENST00000636449 85 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MIR1244-4-202ENST00000636813 85 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 MTND5P6-201ENST00000422338 1798 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 LINC02555-201ENST00000563933 1951 ntBASIC3.27□□□□□ -1.89
USP35Q9P2H5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
USP35Q9P2H5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP35Q9P2H5 RNU6-545P-201ENST00000362681 104 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 Y_RNA.164-201ENST00000363709 102 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 Y_RNA.179-201ENST00000363844 90 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 Y_RNA.557-201ENST00000384680 107 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 RNA5SP465-201ENST00000391195 109 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.26□□□□□ -1.89
USP35Q9P2H5 MTND4P28-201ENST00000426217 387 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 NDUFB4P10-201ENST00000452541 359 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 RNU7-87P-201ENST00000459343 62 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.26□□□□□ -1.89
USP35Q9P2H5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.26□□□□□ -1.89
USP35Q9P2H5 MIR5695-201ENST00000579717 85 ntBASIC3.26□□□□□ -1.89
USP35Q9P2H5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.26□□□□□ -1.89
USP35Q9P2H5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP35Q9P2H5 RNU6-1115P-201ENST00000362490 106 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 Y_RNA.463-201ENST00000384271 102 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 SNORA69.1-201ENST00000390904 137 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 RNA5SP210-201ENST00000391034 120 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.25□□□□□ -1.89
USP35Q9P2H5 MTCO1P44-201ENST00000441935 243 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 AL357134.1-201ENST00000445848 426 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.25□□□□□ -1.89
USP35Q9P2H5 HMGN2P23-201ENST00000456759 269 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 AC067942.3-201ENST00000512025 362 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 RNU6-976P-201ENST00000516086 111 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.25□□□□□ -1.89
USP35Q9P2H5 AC087588.2-201ENST00000617667 426 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 MIR6873-201ENST00000622788 63 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 AC012640.5-201ENST00000623897 319 ntBASIC3.25□□□□□ -1.89
USP35Q9P2H5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP35Q9P2H5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP35Q9P2H5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP35Q9P2H5 MIR340-201ENST00000362125 95 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 RNU1-58P-201ENST00000362413 163 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 Y_RNA.358-201ENST00000365491 99 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 HMGN2P9-201ENST00000476875 229 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 RNU6-1170P-201ENST00000515974 106 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 RNU6-699P-201ENST00000517081 110 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 RNU2-19P-201ENST00000517288 84 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC093023.1-201ENST00000547375 507 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 AC130454.1-201ENST00000622948 401 ntBASIC3.24□□□□□ -1.89
USP35Q9P2H5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.24□□□□□ -1.89
USP35Q9P2H5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP35Q9P2H5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP35Q9P2H5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
USP35Q9P2H5 RNU6-975P-201ENST00000384296 105 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 AC114482.1-201ENST00000418010 247 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 AC091179.3-201ENST00000474761 144 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 RNU6-948P-201ENST00000516374 107 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 Y_RNA.683-201ENST00000516508 93 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 AL050343.2-201ENST00000607338 280 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 AL078596.1-201ENST00000624856 447 ntBASIC3.23□□□□□ -1.89
USP35Q9P2H5 Y_RNA.428-201ENST00000384078 102 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 Y_RNA.460-201ENST00000384255 102 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 Y_RNA.579-201ENST00000390939 94 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 AL078595.1-201ENST00000404458 226 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 Y_RNA.592-201ENST00000410274 109 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 AC010531.2-201ENST00000465012 153 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 RNU6-911P-201ENST00000516523 104 ntBASIC3.22□□□□□ -1.89
USP35Q9P2H5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.22□□□□□ -1.89
USP35Q9P2H5 AC125232.2-201ENST00000592457 143 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms