Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 RNU7-34P-201ENST00000459394 64 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 RNU7-57P-201ENST00000459540 60 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC010486.2-201ENST00000505572 483 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 HSPE1P23-201ENST00000509838 286 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC105185.1-201ENST00000518705 535 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC022616.6-201ENST00000520479 119 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 SNORA59B-202ENST00000578183 701 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 MIR4667-201ENST00000578933 66 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 MIR5006-201ENST00000583027 110 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC064872.1-201ENST00000604823 1072 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC106754.2-201ENST00000623006 233 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 AC097372.5-201ENST00000623665 376 ntBASIC0.2□□□□□ -2.38
PHRF1Q9P1Y6 Y_RNA.97-201ENST00000363094 102 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RNU5E-10P-201ENST00000363506 118 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 Y_RNA.302-201ENST00000364997 102 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-641P-201ENST00000384006 107 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RNA5SP504-201ENST00000410676 117 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RPS24P1-201ENST00000438550 371 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AC093019.1-201ENST00000443135 252 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AC002350.1-201ENST00000490759 375 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-685P-201ENST00000517088 95 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 MTND4LP18-201ENST00000526864 291 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AC022878.1-201ENST00000530684 149 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 MIR5695-201ENST00000579717 85 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 MIR4999-201ENST00000585029 91 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 BNIP3P40-201ENST00000596017 556 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AL158211.2-201ENST00000607282 395 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 AC027807.2-201ENST00000616099 408 ntBASIC0.19□□□□□ -2.38
PHRF1Q9P1Y6 RNY4P3-201ENST00000365254 95 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 SNORA2.2-201ENST00000365473 135 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 SNORD116-13-201ENST00000384408 92 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 SNORD89-201ENST00000390981 114 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1093P-201ENST00000391194 107 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 MTCYBP36-201ENST00000404146 440 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL355796.1-201ENST00000406706 323 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 CETN4P-201ENST00000432407 469 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 USP9YP28-201ENST00000435142 589 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL031313.1-201ENST00000448435 256 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL163973.1-201ENST00000484753 577 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL359999.1-201ENST00000604513 294 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL359075.3-201ENST00000613288 217 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AC138649.3-201ENST00000622154 254 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 AL138960.2-201ENST00000625145 535 ntBASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.18□□□□□ -2.38
PHRF1Q9P1Y6 MTND4P4-201ENST00000439033 1366 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1287P-201ENST00000362914 107 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU4-76P-201ENST00000364509 141 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-336P-201ENST00000364891 107 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-434P-201ENST00000384376 107 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-505P-201ENST00000384427 107 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1060P-201ENST00000384664 107 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AL034345.1-201ENST00000407768 123 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AC016717.1-201ENST00000448918 286 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 SNORA31.10-201ENST00000516482 106 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1069P-201ENST00000516612 133 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AC109810.1-201ENST00000534066 224 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AC073539.2-201ENST00000597113 165 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AC006001.4-201ENST00000622243 395 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 MIR6516-201ENST00000630554 81 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 U6.108-201ENST00000637764 58 ntBASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.17□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-179P-201ENST00000363350 107 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-39P-201ENST00000384344 107 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 Y_RNA.504-201ENST00000384481 104 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MIR586-201ENST00000385035 97 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 NFU1P2-201ENST00000448700 469 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC074290.1-201ENST00000448883 135 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC116562.3-201ENST00000506136 177 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC068587.5-201ENST00000528506 175 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MTND1P15-201ENST00000579262 949 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC022217.4-201ENST00000604389 163 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AL078595.3-201ENST00000623815 1166 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-1200P-201ENST00000384162 107 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MIR660-201ENST00000385235 97 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNA5SP109-201ENST00000391010 116 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-757P-201ENST00000410334 100 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MTND3P17-201ENST00000416968 344 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AL512286.1-201ENST00000439244 400 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 MTCO2P7-201ENST00000446518 666 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 USP9YP25-201ENST00000457708 443 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 RNU6-221P-201ENST00000459541 99 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC007215.1-201ENST00000464893 276 ntBASIC0.16□□□□□ -2.38
PHRF1Q9P1Y6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms