Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MRPL42P3-201ENST00000401492 326 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 BX510359.4-201ENST00000423750 193 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 RNU6-107P-201ENST00000516643 102 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 SNORA70.24-201ENST00000517233 118 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AP002770.2-201ENST00000543613 532 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.77□□□□□ -1.97
DDX56Q9NY93 AC013412.1-201ENST00000610687 192 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AL590240.4-201ENST00000616908 390 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 snoZ196.1-201ENST00000625269 89 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DDX56Q9NY93 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
DDX56Q9NY93 AC005592.1-201ENST00000566527 1640 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX56Q9NY93 RNY3P4-201ENST00000384428 101 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 Y_RNA.526-201ENST00000384572 110 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 AC008134.1-201ENST00000420943 193 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX56Q9NY93 RNU6-856P-201ENST00000516959 98 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 SUMO2P18-201ENST00000518873 252 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 GNAI2P1-201ENST00000541815 315 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
DDX56Q9NY93 AC022432.1-201ENST00000595739 310 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.76□□□□□ -1.97
DDX56Q9NY93 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
DDX56Q9NY93 AL159152.1-201ENST00000635019 2587 ntBASIC2.76□□□□□ -1.97
DDX56Q9NY93 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX56Q9NY93 AC245060.5-201ENST00000610778 3293 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 RNA5SP361-201ENST00000362686 118 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 SNORD87-201ENST00000364849 89 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 Y_RNA.645-201ENST00000391229 102 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 SNORA11.1-201ENST00000408133 129 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 SNORD12B-201ENST00000410433 91 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 RNA5SP504-201ENST00000410676 117 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 TOMM22P2-201ENST00000430735 237 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.75□□□□□ -1.97
DDX56Q9NY93 AC055731.1-201ENST00000474387 401 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 SNORA31.15-201ENST00000516771 132 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 AP005660.1-201ENST00000522972 293 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 AC005786.1-201ENST00000588553 154 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 AC006023.1-201ENST00000603944 259 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 AL049779.4-201ENST00000604500 156 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 U1.36-201ENST00000620684 176 ntBASIC2.75□□□□□ -1.97
DDX56Q9NY93 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.75□□□□□ -1.97
DDX56Q9NY93 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
DDX56Q9NY93 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
DDX56Q9NY93 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.75□□□□□ -1.97
DDX56Q9NY93 SNORD114-6-201ENST00000364393 72 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 Y_RNA.333-201ENST00000365274 102 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RNU6-318P-201ENST00000384283 103 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 Y_RNA.498-201ENST00000384460 102 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RNU6-57P-201ENST00000411348 103 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RPL23AP83-201ENST00000434984 473 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 MTND2P29-201ENST00000438595 412 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC016717.1-201ENST00000448918 286 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RNU6-1146P-201ENST00000516282 102 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 SCARNA15.1-201ENST00000516384 125 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 SNORA40.14-201ENST00000516543 86 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 RNU6-1137P-201ENST00000517073 99 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC104695.3-201ENST00000604052 296 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC010297.1-201ENST00000623948 149 ntBASIC2.74□□□□□ -1.97
DDX56Q9NY93 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
DDX56Q9NY93 AC008555.8-201ENST00000623602 2168 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR340-201ENST00000362125 95 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 Y_RNA.27-201ENST00000362540 103 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 RNU6-1266P-201ENST00000362794 105 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR491-201ENST00000384877 84 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR548B-201ENST00000385247 97 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
DDX56Q9NY93 SNORD78.2-201ENST00000391076 69 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR1283-2-201ENST00000408621 87 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 HMGN2P3-201ENST00000433603 273 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 HMGN2P5-201ENST00000436882 273 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 AL353689.1-201ENST00000438895 199 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 AC112492.4-201ENST00000456549 352 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 RNU6-475P-201ENST00000516073 104 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX56Q9NY93 AC004486.1-201ENST00000546846 233 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 AC079600.2-201ENST00000550076 130 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR3169-201ENST00000578032 83 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.73□□□□□ -1.97
DDX56Q9NY93 MIR3200-201ENST00000580767 85 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 RPS29P30-201ENST00000600975 111 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
DDX56Q9NY93 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.73□□□□□ -1.97
DDX56Q9NY93 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX56Q9NY93 Y_RNA.158-201ENST00000363651 101 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 RNU6-1264P-201ENST00000383891 107 ntBASIC2.72□□□□□ -1.97
DDX56Q9NY93 SNORA6-201ENST00000384033 151 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms