Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RN7SKP220-201ENST00000410611 288 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 RNU6-436P-201ENST00000516171 114 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.709-201ENST00000516952 92 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC109810.1-201ENST00000534066 224 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC011603.4-201ENST00000611325 277 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC005520.5-201ENST00000613926 164 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC024581.2-201ENST00000619986 252 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMPD4Q9NXE4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU6-199P-201ENST00000362954 107 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU6-799P-201ENST00000363567 107 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU6-476P-201ENST00000384726 107 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 MIR544A-201ENST00000384855 91 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RAC1P5-201ENST00000512182 576 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU1-61P-201ENST00000516107 151 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 MIR4474-201ENST00000579189 78 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMPD4Q9NXE4 AC000403.1-201ENST00000613696 3585 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 RNU6-103P-201ENST00000363686 107 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.179-201ENST00000363844 90 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 RNU6-755P-201ENST00000364400 103 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 MIR626-201ENST00000385032 94 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 SNORA59A-201ENST00000459326 152 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AL356157.2-201ENST00000605122 111 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AL033523.1-201ENST00000605153 153 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AC093732.2-201ENST00000607950 274 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AC013791.1-201ENST00000616619 62 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 U2.21-201ENST00000637295 81 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 ZNF702P-202ENST00000434269 1966 ntBASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMPD4Q9NXE4 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-727P-201ENST00000363592 107 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 SNORA80A-201ENST00000363922 136 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-454P-201ENST00000364292 107 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-407P-201ENST00000365280 104 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 Y_RNA.337-201ENST00000365312 102 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-147P-201ENST00000383983 107 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-1144P-201ENST00000384247 104 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-376P-201ENST00000384731 106 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RN7SKP61-201ENST00000410642 295 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC006461.1-201ENST00000412637 326 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC096649.2-201ENST00000416186 393 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC074117.2-201ENST00000417130 397 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC006026.2-201ENST00000457376 180 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC016632.1-201ENST00000503994 196 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU6-589P-201ENST00000516485 107 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNA5SP54-201ENST00000516951 92 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 RNU2-12P-201ENST00000517216 168 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AL391813.1-201ENST00000603098 260 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC019159.1-201ENST00000605094 187 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AL078604.3-201ENST00000615580 211 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 MIR3674-201ENST00000636576 68 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 AC134026.1-201ENST00000623249 2239 ntBASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMPD4Q9NXE4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
SMPD4Q9NXE4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms