Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
ZCCHC3Q9NUD5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU1-62P-201ENST00000362599 164 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 Y_RNA.301-201ENST00000364990 103 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-17P-201ENST00000384245 107 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-18P-201ENST00000384527 107 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-174P-201ENST00000410406 106 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU2-7P-201ENST00000410794 178 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 MTCO3P29-201ENST00000432119 779 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 HMGN2P34-201ENST00000437647 269 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 FO393415.2-201ENST00000480085 343 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 AC092989.1-201ENST00000481235 277 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RPL30P10-201ENST00000488148 337 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RPL36AP21-201ENST00000490372 323 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 AC011352.1-201ENST00000512300 793 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNA5SP481-201ENST00000516814 122 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-295P-201ENST00000516901 104 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 DEFB122-202ENST00000569013 197 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 SNORA77B-201ENST00000578179 125 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 SNORD11B-201ENST00000607707 90 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 snoZ196.1-201ENST00000625269 89 ntBASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ZCCHC3Q9NUD5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-57P-201ENST00000411348 103 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 JTBP1-201ENST00000441314 247 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 RNU4-49P-201ENST00000516080 140 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-718P-201ENST00000516166 105 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-1146P-201ENST00000516282 102 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 SNORA25.14-201ENST00000516481 132 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 RNU1-117P-201ENST00000517041 158 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 AC006001.4-201ENST00000622243 395 ntBASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZCCHC3Q9NUD5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-873P-201ENST00000363833 107 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 SNORA72.2-201ENST00000365028 127 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 MIR548B-201ENST00000385247 97 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AL627390.1-201ENST00000396055 340 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 MIR1277-201ENST00000408536 78 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 RN7SKP101-201ENST00000411376 320 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC016909.1-201ENST00000415916 166 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 RNU1-54P-201ENST00000517181 120 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 MIR4273-201ENST00000582824 84 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC011494.1-201ENST00000596454 237 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AL158827.2-201ENST00000602494 330 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 7SK.7-201ENST00000603504 247 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC093913.1-201ENST00000614178 329 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AC009248.2-201ENST00000619826 254 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 AL691447.3-201ENST00000635020 330 ntBASIC1.53□□□□□ -2.16
ZCCHC3Q9NUD5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 MTND4P12-201ENST00000498999 1377 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 Y_RNA.533-201ENST00000384596 114 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-541P-201ENST00000384709 110 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 MIR515-2-201ENST00000384883 83 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 MIR515-1-201ENST00000384884 83 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-159P-201ENST00000391080 106 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 OOSP1P1-201ENST00000423265 274 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 NDUFB4P10-201ENST00000452541 359 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 RN7SKP210-201ENST00000459176 261 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-221P-201ENST00000459541 99 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 RNU6-970P-201ENST00000516312 107 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 SNORA25.15-201ENST00000516487 89 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AC025647.1-201ENST00000517879 253 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AC002553.4-201ENST00000616896 331 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 AC073869.6-201ENST00000640656 341 ntBASIC1.52□□□□□ -2.17
ZCCHC3Q9NUD5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms