Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 MIR340-201ENST00000362125 95 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNA5SP276-201ENST00000362580 94 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.142-201ENST00000363491 102 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNU4-9P-201ENST00000364951 139 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 SNORA18.2-201ENST00000383865 132 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 U8.10-201ENST00000384260 133 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNU6-601P-201ENST00000384540 107 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 MIR300-201ENST00000401138 83 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AL033519.2-201ENST00000403958 392 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 MTATP6P23-201ENST00000440153 476 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNU6-1016P-201ENST00000516689 94 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 RNU6-548P-201ENST00000517083 115 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 MIR4273-201ENST00000582824 84 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AC243960.4-201ENST00000600532 288 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AC016727.2-201ENST00000603988 621 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 AL590240.4-201ENST00000616908 390 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 MTND5P9-201ENST00000503854 1755 ntBASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SMC4Q9NTJ3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 BX322639.1-202ENST00000423987 2213 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 RNA5SP99-201ENST00000364020 114 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 MIR676-201ENST00000390702 67 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 SNORA48.1-201ENST00000390879 135 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC243428.1-201ENST00000421099 264 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC244636.1-201ENST00000421152 228 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 SNRPEP8-201ENST00000442866 260 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 RPL30P10-201ENST00000488148 337 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 RNU6-120P-201ENST00000516077 103 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC005786.1-201ENST00000588553 154 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC104260.1-201ENST00000616660 539 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 AC084768.2-201ENST00000622736 221 ntBASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SMC4Q9NTJ3 MTND4P12-201ENST00000498999 1377 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.70-201ENST00000362886 110 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 SNORD115-8-201ENST00000363856 82 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 SNORD115-38-201ENST00000365037 82 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 SNORA12.2-201ENST00000391040 156 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 RNA5SP501-201ENST00000410990 112 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AL445305.1-201ENST00000432577 575 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 MTCO1P44-201ENST00000441935 243 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AC007677.1-201ENST00000445757 515 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AL357134.1-201ENST00000445848 426 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AC009237.7-201ENST00000447357 229 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 MRPS17P9-201ENST00000511924 393 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 RNU6-277P-201ENST00000516272 106 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 RNA5SP54-201ENST00000516951 92 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AP005660.1-201ENST00000522972 293 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 SNRPGP20-201ENST00000604477 205 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SMC4Q9NTJ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 MIR32-201ENST00000384965 70 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AC004866.1-201ENST00000411748 78 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 MTCO3P29-201ENST00000432119 779 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AL603825.1-201ENST00000438481 80 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AC005014.2-201ENST00000607795 599 ntBASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.24□□□□□ -2.05
SMC4Q9NTJ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 RNU6-137P-201ENST00000363680 108 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 SNORA75.4-201ENST00000391278 119 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AC009310.1-201ENST00000414414 451 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AC139712.2-201ENST00000424302 339 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AC004386.2-201ENST00000441858 148 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 MTND4P18-201ENST00000447010 465 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 MTND5P20-201ENST00000448677 143 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 HMGB3P17-201ENST00000504195 649 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 RNU2-34P-201ENST00000516534 121 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 APOOP3-201ENST00000536787 586 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AC022254.1-201ENST00000567857 235 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 AL132765.2-201ENST00000610812 351 ntBASIC2.23□□□□□ -2.05
SMC4Q9NTJ3 MIR8081-201ENST00000611533 95 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms