Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC005592.1-201ENST00000566527 1640 ntBASIC0.13□□□□□ -2.39
CDC42SE1Q9NRR8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.13□□□□□ -2.39
CDC42SE1Q9NRR8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 SNORA71.3-201ENST00000362582 128 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 RNY4P34-201ENST00000364779 95 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-348P-201ENST00000384386 107 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MIR216A-201ENST00000385063 110 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MIR134-201ENST00000385258 73 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-177P-201ENST00000411257 104 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MTND3P9-201ENST00000429526 346 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-1037P-201ENST00000459571 107 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 RNU1-117P-201ENST00000517041 158 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AL137161.1-201ENST00000532231 390 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MIR4435-1-201ENST00000582552 80 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 SNORD11B-201ENST00000607707 90 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 AC007014.2-201ENST00000615581 479 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MIR6737-201ENST00000617385 70 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 MIR6079-201ENST00000635807 62 ntBASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
CDC42SE1Q9NRR8 ZNF204P-201ENST00000416749 2397 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 Y_RNA.330-201ENST00000365230 109 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-1327P-201ENST00000365302 105 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-342P-201ENST00000384521 104 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RNU2-29P-201ENST00000410423 189 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RPL31P35-201ENST00000431058 377 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 MTCO2P18-201ENST00000457151 658 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 HMGN2P26-201ENST00000463169 339 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RNU7-12P-201ENST00000516030 62 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 RN7SKP164-201ENST00000516138 266 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC036111.3-201ENST00000526389 112 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 HIF1AP1-201ENST00000553642 175 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 MIR4303-201ENST00000581299 66 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 MIR548AB-201ENST00000584917 84 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC064836.2-201ENST00000609491 462 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AC010608.3-201ENST00000625048 527 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 AL390237.1-201ENST00000404226 1415 ntBASIC0.11□□□□□ -2.39
CDC42SE1Q9NRR8 MIR103A2-201ENST00000362154 78 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 Y_RNA.123-201ENST00000363338 102 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 SNORD87-201ENST00000364849 89 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 Y_RNA.336-201ENST00000365307 109 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-282P-201ENST00000365357 103 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-606P-201ENST00000384721 111 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 MIR670-201ENST00000390142 98 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 SNORA48.2-201ENST00000390926 124 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-903P-201ENST00000391270 109 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNA5SP222-201ENST00000411039 105 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 ISCA1P6-201ENST00000427740 390 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC093019.1-201ENST00000443135 252 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 MRPS10P1-201ENST00000448483 130 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 SNRPFP3-201ENST00000457792 225 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC091133.4-201ENST00000511142 308 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU7-28P-201ENST00000516759 62 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AP001372.4-201ENST00000524889 472 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AC091178.2-201ENST00000584401 117 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 MIR4438-201ENST00000585271 93 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 FAM106DP-201ENST00000586416 501 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 Z84480.1-201ENST00000605131 311 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU6-94P-201ENST00000607728 107 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AL391834.2-201ENST00000609982 546 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 TUSC7.1-201ENST00000610969 165 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AP002371.2-201ENST00000624450 503 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 AL008636.1-201ENST00000625038 1018 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 MIR5087-201ENST00000635826 76 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 OR5AK4P-201ENST00000635912 903 ntBASIC0.1□□□□□ -2.39
CDC42SE1Q9NRR8 RNU5F-7P-201ENST00000363696 115 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD115-8-201ENST00000363856 82 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-1317P-201ENST00000364582 104 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 Y_RNA.265-201ENST00000364677 108 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD115-38-201ENST00000365037 82 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORA36.2-201ENST00000384004 127 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 RNU6-245P-201ENST00000384020 107 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 MIR140-201ENST00000385282 100 ntBASIC0.09□□□□□ -2.4
CDC42SE1Q9NRR8 SNORD105-201ENST00000386910 85 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms