Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 SNRPGP20-201ENST00000604477 205 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 AL138825.1-201ENST00000618587 192 ntBASIC2.35□□□□□ -2.03
DDX4Q9NQI0 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX4Q9NQI0 MIR369-201ENST00000362155 70 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 RNU6-245P-201ENST00000384020 107 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 MIR583-201ENST00000384846 75 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 SNORA40.18-201ENST00000391200 128 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 MIR1294-201ENST00000408503 142 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC018865.2-201ENST00000423631 129 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 USP9YP16-201ENST00000430287 407 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AL137792.2-201ENST00000443484 235 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 USP9YP23-201ENST00000455085 407 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 TOMM22P6-201ENST00000465035 409 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC027288.2-201ENST00000553028 243 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.34□□□□□ -2.03
DDX4Q9NQI0 uc_338.22-201ENST00000622722 187 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 AC022140.2-201ENST00000623500 188 ntBASIC2.34□□□□□ -2.03
DDX4Q9NQI0 BX322639.1-202ENST00000423987 2213 ntBASIC2.34□□□□□ -2.04
DDX4Q9NQI0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.33□□□□□ -2.04
DDX4Q9NQI0 ZNF72P-201ENST00000425869 1908 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU6-694P-201ENST00000364071 147 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU6-280P-201ENST00000364145 104 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.314-201ENST00000365114 102 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 SNORA69.1-201ENST00000390904 137 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU1-139P-201ENST00000391307 165 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 MIR548P-201ENST00000408336 84 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AL354751.2-201ENST00000415471 210 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AL035666.1-201ENST00000446195 348 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU6-1114P-201ENST00000516022 107 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU6-120P-201ENST00000516077 103 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU7-193P-201ENST00000516723 65 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 RNU6-58P-201ENST00000517143 103 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 CYCSP26-201ENST00000534107 320 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AC090517.1-201ENST00000569307 266 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AC090617.3-201ENST00000573670 475 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AC091925.1-201ENST00000623204 462 ntBASIC2.33□□□□□ -2.04
DDX4Q9NQI0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.5-201ENST00000362334 102 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 RNU1-17P-201ENST00000363022 152 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 RNU6-944P-201ENST00000364023 107 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 RNU6-546P-201ENST00000383991 107 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 RNU6-1011P-201ENST00000384668 107 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.661-201ENST00000516003 99 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 RNU6-911P-201ENST00000516523 104 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 AC022616.8-201ENST00000533569 253 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 MIR1244-1-201ENST00000612829 85 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 AC005562.2-201ENST00000618264 111 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 MIR1244-3-201ENST00000635744 85 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 MIR1244-2-201ENST00000636449 85 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 MIR1244-4-202ENST00000636813 85 ntBASIC2.32□□□□□ -2.04
DDX4Q9NQI0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
DDX4Q9NQI0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.39-201ENST00000362620 98 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.106-201ENST00000363189 100 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.394-201ENST00000383942 103 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU6-1227P-201ENST00000383981 107 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU6-26P-201ENST00000383985 107 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU6-159P-201ENST00000391080 106 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 SNORA12-201ENST00000391162 147 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU2-32P-201ENST00000411193 191 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AC005534.2-201ENST00000431047 433 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 RNU7-87P-201ENST00000459343 62 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AP000870.1-201ENST00000472927 406 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AC105758.1-201ENST00000506038 399 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 SNORA31.11-201ENST00000516528 139 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AL442663.2-201ENST00000554385 511 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AC007229.1-201ENST00000590455 412 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 AC016727.2-201ENST00000603988 621 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.31□□□□□ -2.04
DDX4Q9NQI0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
DDX4Q9NQI0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
DDX4Q9NQI0 RNU6-874P-201ENST00000362390 105 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 AC019129.1-201ENST00000403786 261 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.605-201ENST00000410577 105 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 RNA5SP182-201ENST00000516064 82 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms