Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU2-20P-201ENST00000410425 191 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC114482.1-201ENST00000418010 247 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 EIF1P2-201ENST00000428233 350 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC112492.4-201ENST00000456549 352 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 RN7SKP40-201ENST00000517211 242 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AP002770.2-201ENST00000543613 532 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 UBL5P4-201ENST00000562584 236 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC006600.1-201ENST00000572529 153 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 MIR5188-201ENST00000583467 113 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC008121.3-201ENST00000618726 433 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SIX2Q9NPC8 ZNF204P-201ENST00000416749 2397 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.158-201ENST00000363651 101 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SIX2Q9NPC8 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AL445305.1-201ENST00000432577 575 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AL161788.1-201ENST00000441805 169 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AC107032.1-201ENST00000485945 480 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AC132942.1-201ENST00000486753 483 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 SNORA40.14-201ENST00000516543 86 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 MIR2355-201ENST00000517199 87 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AC091144.1-201ENST00000519573 138 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 DEFB131C-201ENST00000528817 165 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AC018630.3-201ENST00000542637 96 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 AL132822.1-201ENST00000617063 513 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 ZNF72P-201ENST00000425869 1908 ntBASIC2.06□□□□□ -2.08
SIX2Q9NPC8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SIX2Q9NPC8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC091812.1-201ENST00000432235 1948 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNU6-873P-201ENST00000363833 107 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNA5SP125-201ENST00000364843 120 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNA5SP240-201ENST00000365355 128 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.422-201ENST00000384054 114 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNU6-639P-201ENST00000384074 107 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 MIR628-201ENST00000385229 95 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.645-201ENST00000391229 102 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNU2-63P-201ENST00000410792 194 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 RNA5SP508-201ENST00000411327 119 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 CBX3P6-201ENST00000430257 527 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 CYP2C59P-201ENST00000457790 269 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 SNORA48.11-201ENST00000517015 89 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 HSPE1P18-201ENST00000517602 280 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AL442163.3-201ENST00000554110 156 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 HSBP1P1-201ENST00000555205 166 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC026470.2-201ENST00000561492 181 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC090517.1-201ENST00000569307 266 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 MIR5695-201ENST00000579717 85 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 AC125232.2-201ENST00000592457 143 ntBASIC2.05□□□□□ -2.08
SIX2Q9NPC8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SIX2Q9NPC8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SIX2Q9NPC8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNU1-23P-201ENST00000363361 144 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNU6-280P-201ENST00000364145 104 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 SNORA18.2-201ENST00000383865 132 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNU6-245P-201ENST00000384020 107 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNU6-281P-201ENST00000384212 103 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AL118496.2-201ENST00000448300 230 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 CKS1BP2-201ENST00000497342 240 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.04□□□□□ -2.08
SIX2Q9NPC8 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 RNU6-1137P-201ENST00000517073 99 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AC022868.1-201ENST00000517767 391 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 MIR4680-201ENST00000580906 66 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AC006504.6-201ENST00000590142 199 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 SNRPGP20-201ENST00000604477 205 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AC005296.1-201ENST00000616145 209 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 AC005562.2-201ENST00000618264 111 ntBASIC2.04□□□□□ -2.08
SIX2Q9NPC8 Z82209.1-201ENST00000422141 2135 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNU6-1301P-201ENST00000362724 104 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNU6-318P-201ENST00000384283 103 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNU6-1160P-201ENST00000384546 104 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 MIR606-201ENST00000384851 96 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 MIR1294-201ENST00000408503 142 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 RNU2-25P-201ENST00000411041 191 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 AC004866.1-201ENST00000411748 78 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.03□□□□□ -2.08
SIX2Q9NPC8 MTCO3P8-201ENST00000453691 755 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 SNORA59A-201ENST00000459326 152 ntBASIC2.03□□□□□ -2.08
SIX2Q9NPC8 SNORA25.14-201ENST00000516481 132 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms