Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC023632.4-201ENST00000517783 191 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC093331.1-201ENST00000521474 169 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC074050.1-201ENST00000563247 211 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AL031274.2-201ENST00000599419 203 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC091152.3-201ENST00000604227 325 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC108081.1-201ENST00000604358 221 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AL121772.2-201ENST00000614331 297 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC034229.5-201ENST00000624258 185 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 AC068647.2-201ENST00000637380 353 ntBASIC3.15□□□□□ -1.91
GCM1Q9NP62 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GCM1Q9NP62 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GCM1Q9NP62 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.15□□□□□ -1.91
GCM1Q9NP62 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.14□□□□□ -1.91
GCM1Q9NP62 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
GCM1Q9NP62 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GCM1Q9NP62 MIR518C-201ENST00000384822 101 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 AL158147.1-201ENST00000443970 75 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 SNRPGP8-201ENST00000454064 226 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 RPS3P1-201ENST00000456781 192 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 RNU6-168P-201ENST00000516189 101 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 RN7SKP209-201ENST00000516888 304 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 AL670379.3-201ENST00000605040 251 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 AC069200.1-201ENST00000609511 323 ntBASIC3.14□□□□□ -1.91
GCM1Q9NP62 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GCM1Q9NP62 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GCM1Q9NP62 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GCM1Q9NP62 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 MIR1278-201ENST00000408753 81 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 RN7SKP27-201ENST00000410684 333 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 NDUFA5P6-201ENST00000542110 379 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 AC133485.4-201ENST00000561835 220 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 AC138907.4-201ENST00000570107 226 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 AP003357.1-201ENST00000604497 148 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 CR392039.5-201ENST00000623201 510 ntBASIC3.13□□□□□ -1.91
GCM1Q9NP62 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GCM1Q9NP62 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
GCM1Q9NP62 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
GCM1Q9NP62 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GCM1Q9NP62 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GCM1Q9NP62 Y_RNA.280-201ENST00000364765 112 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
GCM1Q9NP62 RNA5SP496-201ENST00000391240 109 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 AL133547.1-201ENST00000448546 220 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 SNORD33.1-201ENST00000516213 88 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.12□□□□□ -1.91
GCM1Q9NP62 AC012493.2-201ENST00000595083 291 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.12□□□□□ -1.91
GCM1Q9NP62 RPL17P51-201ENST00000605218 238 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 AC039056.2-201ENST00000622261 511 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 AP000553.6-201ENST00000641242 118 ntBASIC3.12□□□□□ -1.91
GCM1Q9NP62 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GCM1Q9NP62 AL159152.1-201ENST00000635019 2587 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC026241.1-201ENST00000517873 2142 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
GCM1Q9NP62 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC069528.2-201ENST00000624849 1991 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GCM1Q9NP62 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNA5SP124-201ENST00000362739 110 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 U8.1-201ENST00000362843 134 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 Y_RNA.120-201ENST00000363304 110 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU6-1305P-201ENST00000364353 104 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU6-1323P-201ENST00000384025 107 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 SNORA20B-201ENST00000384220 132 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 HMGN2P8-201ENST00000391458 268 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 MIR873-201ENST00000401120 77 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC023141.4-201ENST00000412031 328 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.11□□□□□ -1.91
GCM1Q9NP62 RPL23AP7-203ENST00000449021 469 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU1-95P-201ENST00000516357 160 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU6-1061P-201ENST00000516530 99 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 Y_RNA.694-201ENST00000516677 117 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 RNU1-128P-201ENST00000516704 160 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 HSPE1P18-201ENST00000517602 280 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC008011.1-201ENST00000545989 227 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 AL137843.1-201ENST00000605078 385 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
GCM1Q9NP62 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
GCM1Q9NP62 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GCM1Q9NP62 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
GCM1Q9NP62 AC007496.3-201ENST00000624987 3443 ntBASIC3.1□□□□□ -1.91
GCM1Q9NP62 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 231.5 ms