Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.65□□□□□ -2.31
VCX3AQ9NNX9 AC005858.4-201ENST00000623191 700 ntBASIC0.65□□□□□ -2.31
VCX3AQ9NNX9 OR4G1P-203ENST00000641984 1631 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 RNU6-457P-201ENST00000363999 107 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 U8.10-201ENST00000384260 133 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 RNU5A-2P-201ENST00000384337 116 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 MTATP6P18-201ENST00000417994 673 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AL358934.1-201ENST00000432346 324 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AC104576.1-201ENST00000524225 88 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 HULC.1-201ENST00000612720 240 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 AL390237.1-201ENST00000404226 1415 ntBASIC0.64□□□□□ -2.31
VCX3AQ9NNX9 ZNF204P-201ENST00000416749 2397 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU6-1120P-201ENST00000362988 108 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU1-17P-201ENST00000363022 152 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 Y_RNA.159-201ENST00000363674 87 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNA5SP126-201ENST00000365092 109 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU11-5P-201ENST00000391216 129 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU6-733P-201ENST00000410759 104 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 MTCO3P18-201ENST00000440206 761 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AL031667.1-201ENST00000440222 725 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC073415.1-201ENST00000449240 153 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 SNORA14.1-201ENST00000516113 141 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU6-917P-201ENST00000516294 104 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RN7SKP287-201ENST00000516546 266 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNU6-430P-201ENST00000517078 107 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 RNA5SP454-201ENST00000517231 127 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC004584.2-201ENST00000570407 410 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 FGF7P1-201ENST00000582820 288 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC068790.6-201ENST00000602558 258 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC025811.1-201ENST00000604312 472 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AC093424.1-201ENST00000604999 338 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 uc_338.34-201ENST00000617467 174 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 OR5AK4P-201ENST00000635912 903 ntBASIC0.63□□□□□ -2.31
VCX3AQ9NNX9 AP000568.1-201ENST00000282964 442 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 OOSP1P1-201ENST00000423265 274 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 RNU7-63P-201ENST00000459054 62 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 RNU7-95P-201ENST00000459222 64 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 AC005840.1-201ENST00000498412 377 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 AC090049.2-201ENST00000550377 109 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 MTND1P24-201ENST00000552175 861 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 AC072046.2-201ENST00000618366 268 ntBASIC0.62□□□□□ -2.31
VCX3AQ9NNX9 RNU6-199P-201ENST00000362954 107 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 RNU6-996P-201ENST00000365438 107 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 U8.21-201ENST00000459536 136 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 BET1P1-201ENST00000482276 359 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 TRBVA-201ENST00000498804 316 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 RNA5SP255-201ENST00000516370 107 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 RNU6-344P-201ENST00000516635 111 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 MTND4P7-201ENST00000523876 130 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 FRG2DP-202ENST00000566967 323 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 Z94722.1-201ENST00000604328 474 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 AC109347.2-201ENST00000610220 349 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 U6.73-201ENST00000619194 103 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 FER-210ENST00000628534 558 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.61□□□□□ -2.31
VCX3AQ9NNX9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 RNU6-482P-201ENST00000391068 107 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 SNORA17.3-201ENST00000391159 129 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AL445567.1-201ENST00000439121 144 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 STAG3L5P-204ENST00000443759 179 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 MTND1P27-201ENST00000451117 902 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 TPT1P7-201ENST00000458300 517 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 RNU7-21P-201ENST00000459430 62 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 AC117454.1-201ENST00000491120 168 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 SCOCP1-201ENST00000554676 349 ntBASIC0.6□□□□□ -2.31
VCX3AQ9NNX9 MIR4698-201ENST00000577795 80 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms