Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AC022513.1-201ENST00000624512 117 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RNF41Q9H4P4 ZNF209P-201ENST00000593450 2304 ntBASIC1.69□□□□□ -2.14
RNF41Q9H4P4 BX322639.1-202ENST00000423987 2213 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.166-201ENST00000363730 102 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 SNORD115-32-201ENST00000364079 82 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 RNU4-9P-201ENST00000364951 139 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.473-201ENST00000384333 102 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.533-201ENST00000384596 114 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 MIR548F5-201ENST00000408421 86 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AC138393.2-201ENST00000414742 246 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 MTND2P29-201ENST00000438595 412 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 SNRPGP13-201ENST00000442212 177 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 SNRPEP8-201ENST00000442866 260 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 RPL30P10-201ENST00000488148 337 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 RPS23P5-201ENST00000495419 428 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AL161670.1-201ENST00000554348 137 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 HSBP1P1-201ENST00000555205 166 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AC018462.2-201ENST00000605375 395 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 AC005562.2-201ENST00000618264 111 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 LINC02555-201ENST00000563933 1951 ntBASIC1.68□□□□□ -2.14
RNF41Q9H4P4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RNF41Q9H4P4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU6-545P-201ENST00000362681 104 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU6-595P-201ENST00000363944 107 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 SNORA67.2-201ENST00000384300 149 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 MIR597-201ENST00000384968 97 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNA5SP465-201ENST00000391195 109 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU6-876P-201ENST00000391295 104 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AC074085.1-201ENST00000413598 418 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RPL21P111-201ENST00000418453 477 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AL139396.1-201ENST00000421137 167 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RPS3AP52-201ENST00000435639 297 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 HMGB1P18-201ENST00000438801 619 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AC004386.2-201ENST00000441858 148 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 MTCO3P8-201ENST00000453691 755 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU1-131P-201ENST00000458943 161 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 snoU13.30-201ENST00000458951 104 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.67□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.691-201ENST00000516611 103 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 SNORA20.3-201ENST00000516880 132 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 RNU1-54P-201ENST00000517181 120 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF41Q9H4P4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AL590240.4-201ENST00000616908 390 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AC137590.2-201ENST00000619709 240 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 AC099654.14-201ENST00000638599 341 ntBASIC1.67□□□□□ -2.14
RNF41Q9H4P4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.88-201ENST00000363029 99 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 SNORD81.2-201ENST00000365153 76 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 RNU6-17P-201ENST00000384245 107 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 RNU6-18P-201ENST00000384527 107 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 MIR32-201ENST00000384965 70 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 RNU4-14P-201ENST00000410858 122 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 RN7SKP210-201ENST00000459176 261 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 HMGN1P12-201ENST00000499125 195 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 Y_RNA.670-201ENST00000516255 105 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 RNU6-58P-201ENST00000517143 103 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC027288.2-201ENST00000553028 243 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC026470.2-201ENST00000561492 181 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
RNF41Q9H4P4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
RNF41Q9H4P4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
RNF41Q9H4P4 MIR378A-201ENST00000362177 66 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.48-201ENST00000362710 103 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNU6-160P-201ENST00000384591 107 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 Y_RNA.594-201ENST00000410373 140 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNU6-1050P-201ENST00000410388 107 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNA5SP501-201ENST00000410990 112 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC139712.2-201ENST00000424302 339 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC009237.7-201ENST00000447357 229 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 AC010531.2-201ENST00000465012 153 ntBASIC1.65□□□□□ -2.15
RNF41Q9H4P4 RPL31P58-201ENST00000469001 379 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms