Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
VPS11Q9H270 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS11Q9H270 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS11Q9H270 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS11Q9H270 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS11Q9H270 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS11Q9H270 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS11Q9H270 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
VPS11Q9H270 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 U3.19-201ENST00000390893 196 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 RPS29P4-201ENST00000414733 161 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AC138623.1-201ENST00000418060 216 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS11Q9H270 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS11Q9H270 RNU6-1211P-201ENST00000459179 105 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 Y_RNA.637-201ENST00000459424 114 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS11Q9H270 SNORA31.23-201ENST00000517219 133 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AC100767.1-201ENST00000528178 123 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AC012442.3-202ENST00000636742 206 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 AC092593.1-201ENST00000515413 1815 ntBASIC3.18□□□□□ -1.9
VPS11Q9H270 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.18□□□□□ -1.9
VPS11Q9H270 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS11Q9H270 RNU6-429P-201ENST00000384582 108 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 Y_RNA.542-201ENST00000384641 111 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 MIR670-201ENST00000390142 98 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 RNU6-381P-201ENST00000391259 108 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 RNA5SP390-201ENST00000410191 113 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 EIF1AXP1-201ENST00000419267 435 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 RPL23AP95-201ENST00000426806 265 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 CYCSP35-201ENST00000451978 304 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS11Q9H270 RPS15AP11-201ENST00000594193 385 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 DEFB117-201ENST00000602356 141 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 MIR92B-201ENST00000607575 96 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS11Q9H270 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS11Q9H270 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS11Q9H270 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.17□□□□□ -1.9
VPS11Q9H270 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS11Q9H270 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS11Q9H270 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS11Q9H270 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS11Q9H270 SNORD56.1-201ENST00000362913 68 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 RNA5SP50-201ENST00000363731 107 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 RNU6-622P-201ENST00000384272 103 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 RNY4P18-201ENST00000391107 89 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS11Q9H270 AL513477.1-202ENST00000417061 214 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 MICF-203ENST00000432679 129 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 AC010095.1-201ENST00000443543 144 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS11Q9H270 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS11Q9H270 RNU7-197P-201ENST00000458836 62 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.16□□□□□ -1.9
VPS11Q9H270 CKS1BP7-201ENST00000522230 235 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 MIR4765-201ENST00000585007 77 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 AL137843.1-201ENST00000605078 385 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 AC019159.1-201ENST00000605094 187 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
VPS11Q9H270 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS11Q9H270 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS11Q9H270 RNU6-1255P-201ENST00000363434 112 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 RNU6-899P-201ENST00000363947 107 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS11Q9H270 SNORA36A-201ENST00000384221 132 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 RPL30P13-201ENST00000418873 348 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 EBAG9P1-201ENST00000418955 543 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS11Q9H270 U8.19-201ENST00000459095 133 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 RPL36AP48-201ENST00000485521 314 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 RNA5SP112-201ENST00000515937 99 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 RNU6-659P-201ENST00000516454 104 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 AC026403.1-201ENST00000518938 295 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 AC079598.5-201ENST00000547460 117 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 AC090897.2-201ENST00000581715 130 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 AC024581.2-201ENST00000619986 252 ntBASIC3.15□□□□□ -1.91
VPS11Q9H270 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VPS11Q9H270 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.15□□□□□ -1.91
VPS11Q9H270 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
VPS11Q9H270 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNU6-1010P-201ENST00000362757 107 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNU6-137P-201ENST00000363680 108 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNU6-873P-201ENST00000363833 107 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 U8.9-201ENST00000365667 134 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 Y_RNA.420-201ENST00000384043 110 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNU6-80P-201ENST00000384195 107 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 Y_RNA.525-201ENST00000384570 113 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AL133475.1-201ENST00000404414 305 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RN7SKP220-201ENST00000410611 288 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 RNU6-1245P-201ENST00000411130 106 ntBASIC3.14□□□□□ -1.91
VPS11Q9H270 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VPS11Q9H270 Z98742.2-201ENST00000431564 187 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms