Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.27□□□□□ -2.37
TRIM4Q9C037 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.27□□□□□ -2.37
TRIM4Q9C037 AC073349.3-201ENST00000617616 186 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.27□□□□□ -2.37
TRIM4Q9C037 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.27□□□□□ -2.37
TRIM4Q9C037 RNU6-199P-201ENST00000362954 107 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 RNU4-48P-201ENST00000365559 182 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.26□□□□□ -2.37
TRIM4Q9C037 AL451046.2-201ENST00000403074 277 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AL034345.1-201ENST00000407768 123 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 RNU2-8P-201ENST00000410727 190 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 ELOCP4-201ENST00000420090 333 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 MTND1P20-201ENST00000430341 950 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC079382.1-201ENST00000493346 557 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC112204.1-201ENST00000502591 103 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 RNU1-142P-201ENST00000516682 145 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC105185.1-201ENST00000518705 535 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AL391840.1-201ENST00000571144 367 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 AC097065.2-201ENST00000608159 533 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.26□□□□□ -2.37
TRIM4Q9C037 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.26□□□□□ -2.37
TRIM4Q9C037 AL445984.1-201ENST00000637834 659 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 MTND4P5-201ENST00000435821 1374 ntBASIC0.26□□□□□ -2.37
TRIM4Q9C037 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TRIM4Q9C037 RPS27AP14-201ENST00000422868 454 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC245047.3-201ENST00000429428 127 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC005002.2-201ENST00000438228 269 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 RNU6-917P-201ENST00000516294 104 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.25□□□□□ -2.37
TRIM4Q9C037 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 AL357312.1-201ENST00000603879 298 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 AC005562.2-201ENST00000618264 111 ntBASIC0.25□□□□□ -2.37
TRIM4Q9C037 SNORA16.2-201ENST00000390991 127 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 AL356583.2-201ENST00000426536 280 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 MTATP6P16-201ENST00000434543 526 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.24□□□□□ -2.37
TRIM4Q9C037 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.24□□□□□ -2.37
TRIM4Q9C037 NFU1P2-201ENST00000448700 469 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.24□□□□□ -2.37
TRIM4Q9C037 HSPE1P23-201ENST00000509838 286 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 IGLVI-20-201ENST00000519296 130 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 AC103996.1-201ENST00000555468 102 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 AP001836.1-201ENST00000604675 523 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 AL121992.2-201ENST00000606262 256 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 AL359697.1-201ENST00000624879 587 ntBASIC0.24□□□□□ -2.37
TRIM4Q9C037 RNU6-931P-201ENST00000363850 107 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RNU6-715P-201ENST00000365204 103 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 SNORD115-7-201ENST00000365306 82 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RNU6-533P-201ENST00000384144 107 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
TRIM4Q9C037 MRPL42P3-201ENST00000401492 326 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AC016909.1-201ENST00000415916 166 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
TRIM4Q9C037 AL031274.1-201ENST00000450334 232 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 SNORA68.3-201ENST00000515906 83 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 SNORA70.12-201ENST00000516084 153 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RN7SKP12-201ENST00000516275 143 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RNU6-758P-201ENST00000516292 89 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AC027419.1-201ENST00000522976 328 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AP002001.1-203ENST00000534002 267 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.23□□□□□ -2.37
TRIM4Q9C037 AC025627.3-201ENST00000582078 182 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 MIR5006-201ENST00000583027 110 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AC091805.2-201ENST00000603848 235 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 AL359075.3-201ENST00000613288 217 ntBASIC0.23□□□□□ -2.37
TRIM4Q9C037 RNU5E-10P-201ENST00000363506 118 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 RNU4-92P-201ENST00000363783 136 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 RNU4-68P-201ENST00000364314 141 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 RNU6-348P-201ENST00000384386 107 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 SNORD89-201ENST00000390981 114 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 CDK8P2-201ENST00000415020 547 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 DAP3P1-201ENST00000441522 278 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 AC004386.2-201ENST00000441858 148 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 AC245047.8-201ENST00000456455 284 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 U7.7-201ENST00000459276 60 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 AC116562.3-201ENST00000506136 177 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 RNU6-1178P-201ENST00000516674 107 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 AC068587.5-201ENST00000528506 175 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 SUB1P2-201ENST00000556401 297 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.22□□□□□ -2.37
TRIM4Q9C037 7SK.10-201ENST00000621414 298 ntBASIC0.22□□□□□ -2.37
TRIM4Q9C037 AP000568.1-201ENST00000282964 442 ntBASIC0.21□□□□□ -2.38
TRIM4Q9C037 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms