Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP3BQ96NU0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 Y_RNA.66-201ENST00000362862 102 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-24P-201ENST00000384440 107 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 AL355796.1-201ENST00000406706 323 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 AC245291.1-201ENST00000419501 328 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 EIF4A1P12-201ENST00000551910 141 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 HMGN2P15-201ENST00000585707 270 ntBASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CNTNAP3BQ96NU0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 Y_RNA.313-201ENST00000365095 103 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 MIR93-201ENST00000385024 80 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 MIR921-201ENST00000401133 56 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 AL121890.1-201ENST00000435457 205 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 RN7SL601P-201ENST00000471221 293 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 AC104619.4-201ENST00000510773 249 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 PPBPP1-201ENST00000510807 373 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 EIF4BP1-201ENST00000554881 351 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 AC013412.1-201ENST00000610687 192 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 MIR6891-201ENST00000618788 93 ntBASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP3BQ96NU0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 SNORA18.2-201ENST00000383865 132 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-979P-201ENST00000383896 107 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-675P-201ENST00000384236 104 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RPL21P3-201ENST00000395517 478 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 AL031121.1-201ENST00000406553 254 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNA5SP293-201ENST00000410527 113 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RN7SL323P-201ENST00000494712 295 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 AL592156.1-201ENST00000508758 304 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-830P-201ENST00000516353 107 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-1018P-201ENST00000516577 106 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 RNU2-44P-201ENST00000516795 194 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 AC069240.1-201ENST00000548774 375 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 AC002076.2-201ENST00000617362 122 ntBASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTNAP3BQ96NU0 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RNA5SP502-201ENST00000362694 119 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-776P-201ENST00000364403 104 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RNU6-1022P-201ENST00000365049 104 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AL117342.1-201ENST00000404861 406 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RNA5SP57-201ENST00000459463 123 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AP002884.2-201ENST00000471647 395 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC025518.1-201ENST00000479856 347 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RPL30P14-201ENST00000482744 348 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC106707.2-201ENST00000484182 374 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC083906.5-201ENST00000503722 328 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC100770.1-201ENST00000532310 322 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 MIR3945-201ENST00000581853 98 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC007229.1-201ENST00000590455 412 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 RPS15AP11-201ENST00000594193 385 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC107294.3-201ENST00000609211 526 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 MIR4662A-201ENST00000637499 67 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 AC103988.1-201ENST00000566382 2177 ntBASIC3.97□□□□□ -1.77
CNTNAP3BQ96NU0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms