Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-346P-201ENST00000516288 111 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 AL391813.1-201ENST00000603098 260 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 AL133393.1-201ENST00000603277 287 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 AL078604.3-201ENST00000615580 211 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
ZSWIM3Q96MP5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 MIR22-201ENST00000362190 85 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNU4-15P-201ENST00000362613 141 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-529P-201ENST00000363383 104 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-454P-201ENST00000364292 107 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-81P-201ENST00000365608 104 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.415-201ENST00000384012 112 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-750P-201ENST00000390946 107 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 RNA5SP504-201ENST00000410676 117 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 DEFB131C-201ENST00000528817 165 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZSWIM3Q96MP5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-727P-201ENST00000363592 107 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.580-201ENST00000391004 95 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 RNU2-49P-201ENST00000410666 184 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 RNA5SP38-201ENST00000410750 119 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC024067.1-201ENST00000426199 223 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 BTF3P11-201ENST00000426582 477 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AL606753.1-201ENST00000427435 87 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC022018.1-201ENST00000430685 241 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC140059.1-201ENST00000489238 361 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 SNORD59.2-201ENST00000516873 68 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 EIF4A1P12-201ENST00000551910 141 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 RPL12P50-201ENST00000603116 116 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 SNORD11B-201ENST00000607707 90 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC005562.2-201ENST00000618264 111 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC006111.3-201ENST00000622137 383 ntBASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZSWIM3Q96MP5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AL133475.1-201ENST00000404414 305 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 BMS1P22-201ENST00000414726 313 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 RPS3P1-201ENST00000456781 192 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 HMGB3P3-201ENST00000510526 400 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC091826.1-201ENST00000514065 313 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 RN7SKP132-201ENST00000516001 208 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-436P-201ENST00000516171 114 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC100767.1-201ENST00000528178 123 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC004832.4-201ENST00000608952 331 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC104465.1-201ENST00000611365 139 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 AC068205.3-201ENST00000636385 468 ntBASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ZSWIM3Q96MP5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.8-201ENST00000362353 102 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 SNORD114-19-201ENST00000363072 75 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 SNORD115-30-201ENST00000364117 82 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.272-201ENST00000364696 102 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 Y_RNA.361-201ENST00000365515 120 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 RNA5SP475-201ENST00000410568 110 ntBASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.16□□□□□ -1.9
ZSWIM3Q96MP5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms