Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNU4-42P-201ENST00000364738 142 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 SNORD42.2-201ENST00000365570 69 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 Y_RNA.395-201ENST00000383945 109 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNU6-418P-201ENST00000384035 107 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNU6-1145P-201ENST00000384246 107 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNU6-975P-201ENST00000384296 105 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC018865.2-201ENST00000423631 129 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AL357134.1-201ENST00000445848 426 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 Y_RNA.639-201ENST00000458981 102 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNU6-237P-201ENST00000515985 71 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RNU6-911P-201ENST00000516523 104 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 RN7SKP49-201ENST00000516675 260 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 MIR5694-201ENST00000581190 76 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC078899.2-201ENST00000595282 212 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 U2.1-201ENST00000618978 145 ntBASIC2.5□□□□□ -2.01
CCDC138Q96M89 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC138Q96M89 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CCDC138Q96M89 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC138Q96M89 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC138Q96M89 Y_RNA.112-201ENST00000363250 102 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNU6-23P-201ENST00000363283 107 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 U3.8-201ENST00000363675 217 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNA5SP493-201ENST00000364115 91 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNU1-115P-201ENST00000365329 160 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 Y_RNA.415-201ENST00000384012 112 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 MIR628-201ENST00000385229 95 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 NDUFB4P10-201ENST00000452541 359 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 RNU7-57P-201ENST00000459540 60 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 MIR3945-201ENST00000581853 98 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 uc_338.22-201ENST00000622722 187 ntBASIC2.49□□□□□ -2.01
CCDC138Q96M89 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC138Q96M89 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.49□□□□□ -2.01
CCDC138Q96M89 MIR369-201ENST00000362155 70 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 RNA5SP361-201ENST00000362686 118 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 SNORD87-201ENST00000364849 89 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 Y_RNA.496-201ENST00000384444 101 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC138Q96M89 AL137792.2-201ENST00000443484 235 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 UBL5P3-201ENST00000475112 231 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC138Q96M89 RNU2-19P-201ENST00000517288 84 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 IGLV3-17-201ENST00000519099 244 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 SNRPGP18-201ENST00000553000 214 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 AC092447.9-201ENST00000603395 144 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC138Q96M89 AC138305.3-201ENST00000624988 240 ntBASIC2.48□□□□□ -2.01
CCDC138Q96M89 Y_RNA.39-201ENST00000362620 98 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 RNU6-1301P-201ENST00000362724 104 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 Y_RNA.813-201ENST00000364639 102 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 RNU6-318P-201ENST00000384283 103 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 RNU6-1235P-201ENST00000384559 107 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 MIR196B-201ENST00000384852 84 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 MIR1283-2-201ENST00000408621 87 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AC096644.2-201ENST00000429278 159 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AC016717.1-201ENST00000448918 286 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 RNU6-498P-201ENST00000459468 107 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AC055731.1-201ENST00000474387 401 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC138Q96M89 AC023442.1-201ENST00000531247 422 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AL442163.3-201ENST00000554110 156 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 VN1R91P-201ENST00000594377 169 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 AL138825.1-201ENST00000618587 192 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.47□□□□□ -2.01
CCDC138Q96M89 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR449A-201ENST00000362113 91 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR27B-201ENST00000385129 97 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR548B-201ENST00000385247 97 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MTCO3P19-201ENST00000415864 321 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 AC007677.1-201ENST00000445757 515 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 PCNPP5-201ENST00000452246 481 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC138Q96M89 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC138Q96M89 AC074133.1-201ENST00000515696 183 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 AP005660.1-201ENST00000522972 293 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR3169-201ENST00000578032 83 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR4672-201ENST00000583126 81 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 AC007229.1-201ENST00000590455 412 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 MIR203B-201ENST00000636080 86 ntBASIC2.46□□□□□ -2.02
CCDC138Q96M89 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC138Q96M89 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC138Q96M89 RNA5SP456-201ENST00000364002 114 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms