Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 Y_RNA.405-201ENST00000383979 100 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 Y_RNA.451-201ENST00000384200 100 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 SNORA70B-201ENST00000384210 135 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 Y_RNA.524-201ENST00000384564 100 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 Y_RNA.561-201ENST00000384694 100 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 RNU6-1106P-201ENST00000390845 107 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 RNA5SP213-201ENST00000391031 106 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AC099677.2-201ENST00000436385 175 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AP000870.1-201ENST00000472927 406 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 SCARNA16.2-201ENST00000516520 172 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 Y_RNA.691-201ENST00000516611 103 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AC087441.2-201ENST00000529141 262 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 APOOP3-201ENST00000536787 586 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AC016925.2-201ENST00000605108 242 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.22□□□□□ -2.21
LINC00477Q96M19 uc_338.5-201ENST00000611839 155 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AC025253.1-201ENST00000613623 543 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
LINC00477Q96M19 MTND4P12-201ENST00000498999 1377 ntBASIC1.21□□□□□ -2.21
LINC00477Q96M19 RNU6-727P-201ENST00000363592 107 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-595P-201ENST00000363944 107 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNY3P11-201ENST00000364153 102 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 SNORD116-29-201ENST00000384516 83 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-601P-201ENST00000384540 107 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU11-3P-201ENST00000391111 133 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-510P-201ENST00000391239 108 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 Y_RNA.646-201ENST00000410980 101 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RN7SKP101-201ENST00000411376 320 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 SRIP3-201ENST00000413200 219 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RPS26P42-201ENST00000413485 326 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 HSPE1P24-201ENST00000450782 238 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 MTCO3P10-201ENST00000455912 772 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC016925.1-201ENST00000458303 298 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC007215.1-201ENST00000464893 276 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 HMGN2P9-201ENST00000476875 229 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC114801.2-201ENST00000503825 781 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU5F-4P-201ENST00000516581 114 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-1016P-201ENST00000516689 94 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-250P-201ENST00000516958 103 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU6-58P-201ENST00000517143 103 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC105029.1-201ENST00000520250 669 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC093027.1-201ENST00000546698 429 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 MIR5701-3-201ENST00000578890 82 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 MIR4255-201ENST00000579351 72 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC005730.3-201ENST00000583067 366 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 MIR5701-1-201ENST00000585138 82 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC010900.2-201ENST00000604508 210 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AL357075.2-201ENST00000614906 189 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 MIR5701-2-201ENST00000615634 82 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC005562.2-201ENST00000618264 111 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.21□□□□□ -2.22
LINC00477Q96M19 MTND4LP32-201ENST00000636111 270 ntBASIC1.21□□□□□ -2.22
LINC00477Q96M19 RNU1-58P-201ENST00000362413 163 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 SNORA72.1-201ENST00000363485 129 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 Y_RNA.166-201ENST00000363730 102 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 RNU6-873P-201ENST00000363833 107 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 RNU6-439P-201ENST00000384188 106 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 RNU6-17P-201ENST00000384245 107 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 RNU6-18P-201ENST00000384527 107 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 MIR10B-201ENST00000385011 110 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AC016909.1-201ENST00000415916 166 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AC007098.1-201ENST00000420122 367 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AC123900.1-201ENST00000420390 96 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AC060773.1-201ENST00000421698 310 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AL590556.1-201ENST00000423231 483 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.2□□□□□ -2.22
LINC00477Q96M19 MTND3P23-201ENST00000431980 347 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AL117351.2-201ENST00000513571 157 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 ACA59.1-201ENST00000515966 143 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 MIR5006-201ENST00000583027 110 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AC125232.2-201ENST00000592457 143 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 MZT1P2-201ENST00000604387 248 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 AL669831.3-213ENST00000636676 183 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LINC00477Q96M19 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
LINC00477Q96M19 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
LINC00477Q96M19 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
LINC00477Q96M19 Y_RNA.2-201ENST00000362330 96 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU6-661P-201ENST00000362409 107 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNA5SP361-201ENST00000362686 118 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 Y_RNA.99-201ENST00000363138 105 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 SNORD31B-201ENST00000364977 69 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU6-596P-201ENST00000365395 98 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 Y_RNA.415-201ENST00000384012 112 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 RNU6-310P-201ENST00000384655 107 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 MIR504-201ENST00000385065 83 ntBASIC1.19□□□□□ -2.22
LINC00477Q96M19 SNORA75.4-201ENST00000391278 119 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms