Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RPS27P26-201ENST00000494583 239 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF1Q92994 RNU6-255P-201ENST00000516957 105 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF1Q92994 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.42□□□□□ -1.86
BRF1Q92994 AC006380.1-201ENST00000603598 186 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 AC005828.6-201ENST00000606610 232 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.42□□□□□ -1.86
BRF1Q92994 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
BRF1Q92994 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
BRF1Q92994 AC073346.2-201ENST00000624724 2058 ntBASIC3.42□□□□□ -1.86
BRF1Q92994 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BRF1Q92994 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
BRF1Q92994 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRF1Q92994 RNU1-35P-201ENST00000362782 153 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 RNU6-454P-201ENST00000364292 107 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 Y_RNA.304-201ENST00000365011 112 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 SNORA18.2-201ENST00000383865 132 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 AL451074.5-201ENST00000415894 435 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 RPS29P6-201ENST00000438196 145 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF1Q92994 RNU2-44P-201ENST00000516795 194 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF1Q92994 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.41□□□□□ -1.86
BRF1Q92994 MIR3145-201ENST00000580727 82 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 MIR5006-201ENST00000583027 110 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 AC010620.2-201ENST00000600135 313 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 DEFB117-201ENST00000602356 141 ntBASIC3.41□□□□□ -1.86
BRF1Q92994 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.41□□□□□ -1.86
BRF1Q92994 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
BRF1Q92994 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
BRF1Q92994 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
BRF1Q92994 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
BRF1Q92994 Y_RNA.233-201ENST00000364407 101 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 SNORA67.2-201ENST00000384300 149 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.4□□□□□ -1.87
BRF1Q92994 RPL31P41-201ENST00000477967 372 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.4□□□□□ -1.87
BRF1Q92994 RNU6-436P-201ENST00000516171 114 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 AC022559.1-201ENST00000520905 205 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.4□□□□□ -1.87
BRF1Q92994 AC091953.5-201ENST00000622919 233 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 snoU18.1-201ENST00000629629 71 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.87
BRF1Q92994 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
BRF1Q92994 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF1Q92994 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF1Q92994 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRF1Q92994 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
BRF1Q92994 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF1Q92994 Y_RNA.240-201ENST00000364469 95 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 Y_RNA.262-201ENST00000364641 102 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 SNORA51.4-201ENST00000364993 124 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 SNORA70.4-201ENST00000365509 134 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 RNU6-1083P-201ENST00000384022 107 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 MIR181A2-201ENST00000384863 110 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 U3.40-201ENST00000408706 208 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 OOSP1P1-201ENST00000423265 274 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 EIF4EP4-201ENST00000424916 578 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 AC022018.1-201ENST00000430685 241 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.39□□□□□ -1.87
BRF1Q92994 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 Y_RNA.662-201ENST00000516028 97 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.39□□□□□ -1.87
BRF1Q92994 MIR5692C2-201ENST00000577959 77 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 AL162274.2-201ENST00000614406 332 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
BRF1Q92994 AC091564.4-201ENST00000533934 2194 ntBASIC3.39□□□□□ -1.87
BRF1Q92994 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.39□□□□□ -1.87
BRF1Q92994 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
BRF1Q92994 snoU2_19.1-201ENST00000362361 80 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 RNU6-1272P-201ENST00000362776 107 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 Y_RNA.329-201ENST00000365209 107 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 RNU6-211P-201ENST00000384047 107 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 AC024067.1-201ENST00000426199 223 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 AC009414.1-201ENST00000427200 443 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 TOMM22P2-201ENST00000430735 237 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF1Q92994 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF1Q92994 SCGB1D5P-201ENST00000515134 247 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 RNA5SP112-201ENST00000515937 99 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 RNU6-107P-201ENST00000516643 102 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.38□□□□□ -1.87
BRF1Q92994 MIR4325-201ENST00000583049 90 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF1Q92994 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.38□□□□□ -1.87
BRF1Q92994 AL365265.1-201ENST00000621045 234 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 AC008873.1-201ENST00000625051 138 ntBASIC3.38□□□□□ -1.87
BRF1Q92994 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
BRF1Q92994 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
BRF1Q92994 RNU6-653P-201ENST00000363074 106 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 U3.8-201ENST00000363675 217 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 RNA5SP387-201ENST00000364226 106 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 SNORD32B-201ENST00000364460 84 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 SNORD87-201ENST00000364849 89 ntBASIC3.37□□□□□ -1.87
BRF1Q92994 MIR512-1-201ENST00000384913 84 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms