Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC007395.1-201ENST00000451333 677 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 AC234781.5-201ENST00000508429 271 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 SNORA25.14-201ENST00000516481 132 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 EIF4A1P12-201ENST00000551910 141 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 AC026470.2-201ENST00000561492 181 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 SNRPGP20-201ENST00000604477 205 ntBASIC3.2□□□□□ -1.9
RTF1Q92541 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTF1Q92541 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RTF1Q92541 Y_RNA.84-201ENST00000363011 104 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 Y_RNA.350-201ENST00000365409 98 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RNU6-926P-201ENST00000384075 107 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 Y_RNA.489-201ENST00000384410 101 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RNU2-25P-201ENST00000411041 191 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RNU6-847P-201ENST00000411115 108 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 AC139712.2-201ENST00000424302 339 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 EIF4EP4-201ENST00000424916 578 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 AL445305.1-201ENST00000432577 575 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 TRBV12-1-201ENST00000479785 344 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RPL26P26-201ENST00000480251 434 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 AC098869.1-201ENST00000481627 292 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 MRPS36P2-201ENST00000512569 299 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RNU6-570P-201ENST00000517051 105 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 AC002064.3-201ENST00000623448 346 ntBASIC3.19□□□□□ -1.9
RTF1Q92541 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RTF1Q92541 AC069528.2-201ENST00000624849 1991 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 SNORD81.1-201ENST00000363064 77 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 RNU6-486P-201ENST00000363116 107 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 U3.9-201ENST00000363823 204 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 Y_RNA.562-201ENST00000384695 113 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 Y_RNA.581-201ENST00000391017 97 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 Y_RNA.595-201ENST00000410403 105 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 RNU6-1203P-201ENST00000410703 110 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 RPS23P5-201ENST00000495419 428 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 RAC1P5-201ENST00000512182 576 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 SCARNA17.1-201ENST00000516211 143 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 SCARNA17.2-201ENST00000516334 143 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 RNA5SP24-201ENST00000516478 95 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 Y_RNA.683-201ENST00000516508 93 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 AC021269.2-201ENST00000532318 330 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 AC103810.1-201ENST00000579873 453 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.18□□□□□ -1.9
RTF1Q92541 AC010620.2-201ENST00000600135 313 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 SCARNA17.4-201ENST00000614296 143 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 AC064859.1-201ENST00000624741 174 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 AC099654.7-201ENST00000635788 2127 ntBASIC3.18□□□□□ -1.9
RTF1Q92541 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RTF1Q92541 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTF1Q92541 MIR335-201ENST00000362173 94 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 Y_RNA.14-201ENST00000362415 103 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 RNU1-62P-201ENST00000362599 164 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 snoU2_19.2-201ENST00000363024 80 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 Y_RNA.179-201ENST00000363844 90 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 RNU1-109P-201ENST00000383960 147 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 Y_RNA.447-201ENST00000384184 113 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 FO393413.1-201ENST00000402892 195 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 RNU4-53P-201ENST00000410828 140 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 AC005002.2-201ENST00000438228 269 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 AC010095.1-201ENST00000443543 144 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 RPL31P41-201ENST00000477967 372 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AC145146.1-201ENST00000496370 254 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.17□□□□□ -1.9
RTF1Q92541 AC074133.1-201ENST00000515696 183 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 SNORA40.9-201ENST00000515895 93 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.17□□□□□ -1.9
RTF1Q92541 MIR3945-201ENST00000581853 98 ntBASIC3.17□□□□□ -1.9
RTF1Q92541 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
RTF1Q92541 RNU6-379P-201ENST00000363813 104 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RNU6-1318P-201ENST00000365389 103 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RNU6-793P-201ENST00000384233 104 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RNU6-937P-201ENST00000384325 106 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RNU2-38P-201ENST00000410856 79 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RNU5A-5P-201ENST00000411054 116 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 MICF-203ENST00000432679 129 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 RPL39P38-201ENST00000467018 153 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 SEM1P1-201ENST00000506694 209 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 AK6P2-201ENST00000549020 471 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 AC233702.2-202ENST00000562547 291 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 MIR4423-201ENST00000580922 80 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.16□□□□□ -1.9
RTF1Q92541 AP001282.2-201ENST00000616149 309 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 MIR1291-201ENST00000627649 87 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 AC138915.1-201ENST00000565427 1685 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 MTND5P35-201ENST00000557537 1720 ntBASIC3.16□□□□□ -1.9
RTF1Q92541 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RTF1Q92541 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RTF1Q92541 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
RTF1Q92541 SNORD113-8-201ENST00000363497 74 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 Y_RNA.230-201ENST00000364348 109 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 MIR215-201ENST00000384858 110 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 SNORA46.1-201ENST00000391069 153 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 AL390729.2-201ENST00000416137 156 ntBASIC3.15□□□□□ -1.91
RTF1Q92541 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.15□□□□□ -1.91
RTF1Q92541 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms