Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL365361.1-201ENST00000566942 3481 ntBASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.68□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.489-201ENST00000384410 101 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 RNU6-102P-201ENST00000384485 104 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 MIR218-1-201ENST00000384999 110 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.597-201ENST00000410463 100 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 ARL5AP4-201ENST00000430731 512 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 RNU6-625P-201ENST00000459412 107 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 RPL39P38-201ENST00000467018 153 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 SNORD11B-201ENST00000607707 90 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 SDR42E1P4-201ENST00000620894 481 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 AC080128.1-201ENST00000474389 1917 ntBASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.67□□□□□ -1.98
ATG4AQ8WYN0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MIR335-201ENST00000362173 94 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RNU4-90P-201ENST00000362773 141 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RNU6-379P-201ENST00000363813 104 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RNU6-1274P-201ENST00000384557 107 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AL033519.2-201ENST00000403958 392 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 ELOCP21-201ENST00000412558 336 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AL390729.2-201ENST00000416137 156 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RAB28P5-201ENST00000427490 651 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 HSPE1P25-201ENST00000455484 251 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RN7SKP132-201ENST00000516001 208 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 RNU2-44P-201ENST00000516795 194 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MIR3670-2-201ENST00000582974 65 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MIR3670-1-201ENST00000584160 65 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MIR3670-3-201ENST00000584855 65 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AC005176.2-201ENST00000596933 147 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 SNORD113-5-201ENST00000607261 78 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AC011373.1-201ENST00000607270 237 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AC069294.1-201ENST00000608397 350 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MIR3670-4-201ENST00000612260 65 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 MTND5P6-201ENST00000422338 1798 ntBASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
ATG4AQ8WYN0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
ATG4AQ8WYN0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
ATG4AQ8WYN0 AL391987.6-201ENST00000305671 199 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 RNU6-290P-201ENST00000365212 101 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AC108059.2-201ENST00000434626 151 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AC080013.2-201ENST00000460866 323 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 SEPT14P8-201ENST00000508026 178 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 RNU7-110P-201ENST00000516891 62 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 RNU6-586P-201ENST00000517265 104 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 DEFB108E-201ENST00000524692 240 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AC012433.1-201ENST00000588916 398 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AC090425.1-201ENST00000610007 140 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 AL137790.1-201ENST00000634283 177 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.65□□□□□ -1.99
ATG4AQ8WYN0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU6-944P-201ENST00000364023 107 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU6-1318P-201ENST00000365389 103 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU6-21P-201ENST00000384710 107 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU4-30P-201ENST00000410245 143 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNU6-847P-201ENST00000411115 108 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RPL19P1-201ENST00000411635 428 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC105272.1-201ENST00000438604 198 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RPL23AP58-201ENST00000440453 469 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 Y_RNA.680-201ENST00000516441 93 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 RNA5SP367-201ENST00000516557 118 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC127459.3-201ENST00000624328 466 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC006386.2-201ENST00000624491 75 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC012005.1-201ENST00000624575 75 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 AC068205.3-201ENST00000636385 468 ntBASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
ATG4AQ8WYN0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 AC092435.3-201ENST00000565538 3654 ntBASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ATG4AQ8WYN0 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms