Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-845P-201ENST00000362578 103 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1329P-201ENST00000365664 107 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.414-201ENST00000384011 101 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-160P-201ENST00000384591 107 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MIR561-201ENST00000385216 97 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.615-201ENST00000410769 117 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MTND1P17-201ENST00000448961 204 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 PRELID3BP1-201ENST00000457142 540 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.681-201ENST00000516445 113 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1314P-201ENST00000517139 104 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 HSPE1P4-201ENST00000550617 308 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MIR5006-201ENST00000583027 110 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC008749.1-201ENST00000597650 306 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AL034555.1-201ENST00000604816 211 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC018889.1-201ENST00000605372 397 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MIR8076-201ENST00000611401 83 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MIR6128-201ENST00000615528 109 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 CBX3P1-201ENST00000325243 554 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU4-15P-201ENST00000362613 141 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.248-201ENST00000364501 109 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-716P-201ENST00000365621 103 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-784P-201ENST00000384330 106 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.530-201ENST00000384587 101 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNA5SP201-201ENST00000410316 124 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNA5SP450-201ENST00000411206 102 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC009161.1-201ENST00000417306 376 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 MTND4P17-201ENST00000470444 350 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RNU6-358P-201ENST00000516564 75 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC026271.5-201ENST00000577873 130 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 POLR3GP2-201ENST00000588366 668 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 AC008133.2-201ENST00000624540 351 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 TPTEP1-208ENST00000636884 213 ntBASIC1.16□□□□□ -2.22
SHROOM3Q8TF72 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.15□□□□□ -2.22
SHROOM3Q8TF72 LINC02555-201ENST00000563933 1951 ntBASIC1.15□□□□□ -2.22
SHROOM3Q8TF72 AC091812.1-201ENST00000432235 1948 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU1-23P-201ENST00000363361 144 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 SNORD114-23-201ENST00000363536 72 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU6-790P-201ENST00000384479 105 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 MIR521-1-201ENST00000384902 87 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU11-3P-201ENST00000391111 133 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU2-48P-201ENST00000410694 191 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 MTCO1P29-201ENST00000496868 288 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AC005741.1-201ENST00000511094 432 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU5F-4P-201ENST00000516581 114 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU6-612P-201ENST00000516909 102 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AL109918.3-201ENST00000603072 338 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 Z98751.3-201ENST00000604447 521 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 AC122108.2-201ENST00000611946 526 ntBASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SHROOM3Q8TF72 RNU1-58P-201ENST00000362413 163 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 SNORD14D-201ENST00000384390 87 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNU1-148P-201ENST00000384472 162 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNU6-601P-201ENST00000384540 107 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MIR29C-201ENST00000385231 88 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MIR549A-201ENST00000385268 96 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RPL30P16-201ENST00000419341 429 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL139396.1-201ENST00000421137 167 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNU6-329P-201ENST00000459618 107 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC007547.1-201ENST00000462177 490 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC113139.1-201ENST00000605049 239 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC009994.1-201ENST00000606889 253 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL627230.6-201ENST00000611129 280 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AC093913.1-201ENST00000614178 329 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 SCARNA4-201ENST00000629045 128 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL450472.1-202ENST00000637286 180 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNA5SP62-201ENST00000363457 110 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 Y_RNA.433-201ENST00000384089 102 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MIR216A-201ENST00000385063 110 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 MIR1262-201ENST00000408276 93 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RN7SKP61-201ENST00000410642 295 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNU2-7P-201ENST00000410794 178 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 RNU6-1148P-201ENST00000410992 104 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL590135.1-201ENST00000422215 156 ntBASIC1.14□□□□□ -2.23
SHROOM3Q8TF72 AL590632.1-201ENST00000424289 371 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms