Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CETN4P-201ENST00000432407 469 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC074290.1-201ENST00000448883 135 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 MTCO3P8-201ENST00000453691 755 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 SRRM1P2-201ENST00000464531 1192 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC025465.4-201ENST00000513422 638 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 RNU6-1069P-201ENST00000516612 133 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 MIR5695-201ENST00000579717 85 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 Z99497.2-201ENST00000603634 310 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AP000907.4-201ENST00000604143 237 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC022217.4-201ENST00000604389 163 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC027449.1-201ENST00000608890 407 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AC106800.4-201ENST00000614905 153 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 AF246928.1-201ENST00000623768 87 ntBASIC0.74□□□□□ -2.29
CLHC1Q8NHS4 RNU4-79P-201ENST00000362764 141 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 SNORD73A-201ENST00000386062 65 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RNA5SP494-201ENST00000410653 129 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RPL39P5-202ENST00000512505 151 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 HIF1AP1-201ENST00000553642 175 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 MIR5583-1-201ENST00000580941 59 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 MIR6788-201ENST00000618842 66 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC006001.4-201ENST00000622243 395 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 AC005609.4-201ENST00000625071 447 ntBASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
CLHC1Q8NHS4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 RNU7-57P-201ENST00000459540 60 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 RNU6-221P-201ENST00000459541 99 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AC092991.1-201ENST00000477176 376 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 SNORA14.1-201ENST00000516113 141 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 RNU6-759P-201ENST00000516740 103 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AC025647.1-201ENST00000517879 253 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 MTATP6P3-201ENST00000581686 676 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 FGF7P1-201ENST00000582820 288 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AL360219.1-201ENST00000610230 366 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 MIR8054-201ENST00000620877 86 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 AL513423.1-201ENST00000621695 132 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
CLHC1Q8NHS4 MIR373-201ENST00000362273 69 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 MIR200A-201ENST00000384875 90 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNU6-910P-201ENST00000390844 107 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 SNORA12.1-201ENST00000390873 148 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNA5SP323-201ENST00000391094 133 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 MIR1253-201ENST00000408273 105 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNU2-9P-201ENST00000410194 145 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNU6-57P-201ENST00000411348 103 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC008134.1-201ENST00000420943 193 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AL365203.2-201ENST00000423444 196 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC010154.1-201ENST00000425857 269 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 TIMM9P3-201ENST00000428659 274 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 MTCO2P11-201ENST00000431069 680 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 SNORA31.2-201ENST00000516019 134 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNA5SP168-201ENST00000516642 112 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNU1-142P-201ENST00000516682 145 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC025423.5-201ENST00000550230 219 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 SCOCP1-201ENST00000554676 349 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 SUB1P2-201ENST00000556401 297 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC004584.2-201ENST00000570407 410 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 MIR3915-201ENST00000578518 97 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 MIR4424-201ENST00000585257 86 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC068790.6-201ENST00000602558 258 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AC146944.4-201ENST00000602697 718 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 SNRPGP20-201ENST00000604477 205 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 HULC.1-201ENST00000612720 240 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AL359075.3-201ENST00000613288 217 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 AL050303.3-201ENST00000613704 284 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 snoZ196.1-201ENST00000625269 89 ntBASIC0.71□□□□□ -2.3
CLHC1Q8NHS4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 RNU6-505P-201ENST00000384427 107 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 MIR653-201ENST00000385279 96 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 MIR548J-201ENST00000408833 112 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 MTATP6P18-201ENST00000417994 673 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 MTND2P18-201ENST00000419962 1030 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 CCDC34P1-201ENST00000507441 517 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 RNU6-344P-201ENST00000516635 111 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 DEFB108E-201ENST00000524692 240 ntBASIC0.7□□□□□ -2.3
CLHC1Q8NHS4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms