Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 MIR1244-3-201ENST00000635744 85 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
USP38Q8NB14 MIR1244-2-201ENST00000636449 85 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 MIR1244-4-202ENST00000636813 85 ntBASIC2.44□□□□□ -2.02
USP38Q8NB14 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USP38Q8NB14 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.44□□□□□ -2.02
USP38Q8NB14 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USP38Q8NB14 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USP38Q8NB14 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 RNU6-17P-201ENST00000384245 107 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 RNU6-18P-201ENST00000384527 107 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 SNORA11.4-201ENST00000408823 129 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC007098.1-201ENST00000420122 367 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 MTCYBP10-201ENST00000424905 650 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.43□□□□□ -2.02
USP38Q8NB14 MIR2053-201ENST00000459295 91 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 SNORD19B-201ENST00000459623 84 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC093259.1-201ENST00000509755 300 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 RNU6-1198P-201ENST00000516904 67 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 RNU6-58P-201ENST00000517143 103 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 DEFB131C-201ENST00000528817 165 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.43□□□□□ -2.02
USP38Q8NB14 AC026470.2-201ENST00000561492 181 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 UBL5P4-201ENST00000562584 236 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC004584.2-201ENST00000570407 410 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 AC104581.2-201ENST00000572227 430 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.43□□□□□ -2.02
USP38Q8NB14 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
USP38Q8NB14 RNU6-222P-201ENST00000362438 107 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 Y_RNA.106-201ENST00000363189 100 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 SNORA48.3-201ENST00000391081 134 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 WARS2P1-201ENST00000429678 537 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 MTND3P23-201ENST00000431980 347 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 AP000870.1-201ENST00000472927 406 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 ATP5EP1-201ENST00000510257 156 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.42□□□□□ -2.02
USP38Q8NB14 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.42□□□□□ -2.02
USP38Q8NB14 SNORA25.14-201ENST00000516481 132 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 RNA5SP54-201ENST00000516951 92 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
USP38Q8NB14 MIR5695-201ENST00000579717 85 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 AL117336.2-201ENST00000602435 335 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 SNRPGP17-201ENST00000603780 214 ntBASIC2.42□□□□□ -2.02
USP38Q8NB14 RNU4-79P-201ENST00000362764 141 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 BTF3P4-201ENST00000418852 495 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.41□□□□□ -2.02
USP38Q8NB14 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
USP38Q8NB14 AC007215.1-201ENST00000464893 276 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 RNU6-470P-201ENST00000515954 104 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 SCARNA16.3-201ENST00000516595 184 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 AC027288.2-201ENST00000553028 243 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.41□□□□□ -2.02
USP38Q8NB14 AC233702.2-202ENST00000562547 291 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 MIR5701-3-201ENST00000578890 82 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 MIR5701-1-201ENST00000585138 82 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 TCL6_2.1-201ENST00000615162 119 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 MIR5701-2-201ENST00000615634 82 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 AC104985.2-201ENST00000620598 500 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 AL359697.1-201ENST00000624879 587 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP38Q8NB14 MTND5P16-201ENST00000460269 1703 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.41□□□□□ -2.02
USP38Q8NB14 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
USP38Q8NB14 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USP38Q8NB14 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.4□□□□□ -2.03
USP38Q8NB14 RNU6-545P-201ENST00000362681 104 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 RNY1P10-201ENST00000363268 113 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 Y_RNA.146-201ENST00000363549 102 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 SNORD23.1-201ENST00000408212 104 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.4□□□□□ -2.03
USP38Q8NB14 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USP38Q8NB14 USP9YP16-201ENST00000430287 407 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 USP9YP23-201ENST00000455085 407 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 TRMT112P2-201ENST00000512910 132 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 RNU1-117P-201ENST00000517041 158 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.4□□□□□ -2.03
USP38Q8NB14 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.4□□□□□ -2.03
USP38Q8NB14 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.4□□□□□ -2.03
USP38Q8NB14 RPL17P51-201ENST00000605218 238 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 AL359821.1-201ENST00000605519 182 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 ZNF355P-201ENST00000427301 3216 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 BX322639.1-202ENST00000423987 2213 ntBASIC2.4□□□□□ -2.03
USP38Q8NB14 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
USP38Q8NB14 MTND4P29-201ENST00000503122 1372 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 AL596028.1-201ENST00000326971 197 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 RNU6-873P-201ENST00000363833 107 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 Y_RNA.224-201ENST00000364308 111 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 MIR1262-201ENST00000408276 93 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 ELOCP24-201ENST00000456370 334 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 AC105758.1-201ENST00000506038 399 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.39□□□□□ -2.03
USP38Q8NB14 AC080078.3-201ENST00000605407 463 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 AC005296.1-201ENST00000616145 209 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 MTND5P10-201ENST00000603719 1809 ntBASIC2.39□□□□□ -2.03
USP38Q8NB14 RNU1-76P-201ENST00000362903 159 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 RNU6-727P-201ENST00000363592 107 ntBASIC2.38□□□□□ -2.03
USP38Q8NB14 RNU6-457P-201ENST00000363999 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms