Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS26P42-201ENST00000413485 326 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 MTCO2P27-201ENST00000420740 428 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AL121890.1-201ENST00000435457 205 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AC003989.2-201ENST00000440224 169 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.653-201ENST00000459091 95 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AF186996.7-201ENST00000492781 209 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AC107393.1-201ENST00000512403 346 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 CBX3P8-201ENST00000532412 525 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL3Q8N8U3 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 PISRT1.1-201ENST00000616930 107 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AC126177.8-201ENST00000618339 1015 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.9□□□□□ -2.11
RTL3Q8N8U3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.9□□□□□ -2.11
RTL3Q8N8U3 SCARNA4-201ENST00000629045 128 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RTL3Q8N8U3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.11-201ENST00000362375 109 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.315-201ENST00000365117 102 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 RNU6-968P-201ENST00000384076 107 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 SNORA36A-201ENST00000384221 132 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 RNU6-331P-201ENST00000384724 107 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 MIR583-201ENST00000384846 75 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 U8.13-201ENST00000390842 128 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 MTCYBP2-201ENST00000407745 171 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 RPS20P15-201ENST00000412792 311 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 AL035666.1-201ENST00000446195 348 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 snoU13.26-201ENST00000459452 105 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 RPL23AP75-201ENST00000491601 451 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.89□□□□□ -2.11
RTL3Q8N8U3 SCARNA16.2-201ENST00000516520 172 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 RNU6-567P-201ENST00000516746 107 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.89□□□□□ -2.11
RTL3Q8N8U3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
RTL3Q8N8U3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 Z98751.3-201ENST00000604447 521 ntBASIC1.89□□□□□ -2.11
RTL3Q8N8U3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
RTL3Q8N8U3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.2-201ENST00000362330 96 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 U3.9-201ENST00000363823 204 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 SNORD115-32-201ENST00000364079 82 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 RNU4-76P-201ENST00000364509 141 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 SNORD42.2-201ENST00000365570 69 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 RNU6-890P-201ENST00000384121 107 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.460-201ENST00000384255 102 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RTL3Q8N8U3 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 RNU6-1304P-201ENST00000411374 106 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 AC010095.1-201ENST00000443543 144 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 RPL30P10-201ENST00000488148 337 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 YWHAEP4-201ENST00000505390 198 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 RNU6-307P-201ENST00000516743 106 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 SUB1P3-201ENST00000564581 315 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 MIR4273-201ENST00000582824 84 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 AC104984.5-201ENST00000586878 94 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 AC010928.2-201ENST00000588017 287 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
RTL3Q8N8U3 AC084781.2-201ENST00000615568 161 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 AL160413.1-201ENST00000622780 310 ntBASIC1.88□□□□□ -2.11
RTL3Q8N8U3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RTL3Q8N8U3 MTND4P29-201ENST00000503122 1372 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RTL3Q8N8U3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.813-201ENST00000364639 102 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 RNU4-9P-201ENST00000364951 139 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 RNU6-438P-201ENST00000365561 103 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 RNU6-1040P-201ENST00000383974 107 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 MIR559-201ENST00000385188 96 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AC012306.1-201ENST00000423267 114 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.87□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.639-201ENST00000458981 102 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AC021146.2-201ENST00000504736 556 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 HMGN1P13-201ENST00000505795 138 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.87□□□□□ -2.11
RTL3Q8N8U3 GNAI2P1-201ENST00000541815 315 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.87□□□□□ -2.11
RTL3Q8N8U3 CYP4A27P-201ENST00000567218 190 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AC104581.2-201ENST00000572227 430 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 MIR3124-201ENST00000582636 67 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.87□□□□□ -2.11
RTL3Q8N8U3 AC133104.2-201ENST00000615272 193 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 MTND5P10-201ENST00000603719 1809 ntBASIC1.87□□□□□ -2.11
RTL3Q8N8U3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RTL3Q8N8U3 AL356292.1-201ENST00000283110 373 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
RTL3Q8N8U3 U8.10-201ENST00000384260 133 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms