Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 SNORD115-8-201ENST00000363856 82 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 SNORD115-38-201ENST00000365037 82 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 RNU1-100P-201ENST00000365255 165 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 SNORA26.5-201ENST00000391215 123 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 FTH1P15-201ENST00000406984 280 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 RNU2-54P-201ENST00000410299 190 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC074117.2-201ENST00000417130 397 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC009963.1-201ENST00000417265 157 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 CYCTP-201ENST00000504253 315 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 RN7SKP164-201ENST00000516138 266 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC093331.1-201ENST00000521474 169 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 MIR7106-201ENST00000612419 65 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TTC9BQ8N6N2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.24-201ENST00000362508 103 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1255P-201ENST00000363434 112 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 Y_RNA.172-201ENST00000363765 102 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 SNORA18.3-201ENST00000384122 132 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNU6-793P-201ENST00000384233 104 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNY4P18-201ENST00000391107 89 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 MIR1290-201ENST00000408735 78 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 CYCSP49-201ENST00000420810 319 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 PTGES3P4-201ENST00000426243 356 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AC244670.1-201ENST00000436879 112 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AC245047.8-201ENST00000456455 284 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP310-201ENST00000459084 116 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNU6-107P-201ENST00000516643 102 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 SNORA31.16-201ENST00000516773 139 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNU6-703P-201ENST00000516946 107 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AC109810.1-201ENST00000534066 224 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 MIR3674-201ENST00000636576 68 ntBASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TTC9BQ8N6N2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC099654.7-201ENST00000635788 2127 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC118273.1-201ENST00000525324 3006 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNU1-75P-201ENST00000347264 129 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 SNORD56.3-201ENST00000363507 71 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNU6-801P-201ENST00000364087 105 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNU6-407P-201ENST00000365280 104 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1248P-201ENST00000391096 64 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 MIR1289-1-201ENST00000408836 144 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP475-201ENST00000410568 110 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC096649.2-201ENST00000416186 393 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC074290.1-201ENST00000448883 135 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 SCARNA8-201ENST00000515924 131 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP217-201ENST00000515959 91 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RN7SKP132-201ENST00000516001 208 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 RNU2-56P-201ENST00000516826 190 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 AC016256.1-201ENST00000547971 354 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 ZNF702P-202ENST00000434269 1966 ntBASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
TTC9BQ8N6N2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU6-799P-201ENST00000363567 107 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNY1P11-201ENST00000363759 113 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU6-1141P-201ENST00000364520 107 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU1-101P-201ENST00000391171 127 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 U3.40-201ENST00000408706 208 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC012306.1-201ENST00000423267 114 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RAC1P5-201ENST00000512182 576 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU6-436P-201ENST00000516171 114 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU6-581P-201ENST00000516214 105 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNU6-659P-201ENST00000516454 104 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 RNA5SP54-201ENST00000516951 92 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC006380.1-201ENST00000603598 186 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
TTC9BQ8N6N2 TUG1_4.1-201ENST00000619464 181 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms