Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AL445305.1-201ENST00000432577 575 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 Z82188.1-201ENST00000436709 154 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 MTND1P29-201ENST00000448112 647 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 snoU13.23-201ENST00000458863 104 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-498P-201ENST00000459468 107 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNA5SP445-201ENST00000515889 115 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-1281P-201ENST00000516223 105 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU1-117P-201ENST00000517041 158 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 MTND2P38-201ENST00000522536 667 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 ZNF519P2-201ENST00000557032 169 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AC103591.3-201ENST00000608684 209 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 AL353149.1-201ENST00000610667 244 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 MRPL35P1-201ENST00000404272 572 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AL590002.1-201ENST00000406554 418 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 RNU6-908P-201ENST00000410160 94 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC016909.1-201ENST00000415916 166 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 SNRPEP10-201ENST00000420249 274 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC079354.2-201ENST00000453523 154 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 MTND1P11-201ENST00000456661 876 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 snoU13.27-201ENST00000459278 104 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 RNU7-57P-201ENST00000459540 60 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 RNU2-34P-201ENST00000516534 121 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 RNA5SP481-201ENST00000516814 122 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 MIR4742-201ENST00000581069 85 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 PIGPP4-201ENST00000584447 307 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC097065.2-201ENST00000608159 533 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 AC137590.2-201ENST00000619709 240 ntBASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC50Q8IVM0 Y_RNA.38-201ENST00000362617 102 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 Y_RNA.41-201ENST00000362646 102 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 RNU4-75P-201ENST00000364621 146 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 RNU6-790P-201ENST00000384479 105 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 RNU6-95P-201ENST00000384697 107 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 RNA5SP504-201ENST00000410676 117 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 SEPT14P3-201ENST00000439401 183 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 AC027119.1-201ENST00000440877 241 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 AL732372.2-207ENST00000445840 183 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 RPS29P28-201ENST00000446439 141 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 AC009474.2-201ENST00000451383 136 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 SEPT14P2-201ENST00000453405 183 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 AC079140.2-201ENST00000506193 142 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 SEPT14P4-201ENST00000513445 186 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 FO082796.1-201ENST00000523795 183 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 AC015688.6-201ENST00000577737 104 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 SNRPGP20-201ENST00000604477 205 ntBASIC1.26□□□□□ -2.21
CCDC50Q8IVM0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 MTND4P5-201ENST00000435821 1374 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 MIR586-201ENST00000385035 97 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 RNA5SP109-201ENST00000391010 116 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 RNU2-16P-201ENST00000410712 136 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 NDUFA5P4-201ENST00000436704 385 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AL606517.2-201ENST00000442855 241 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AL078604.3-201ENST00000615580 211 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 AC099654.12-201ENST00000639868 649 ntBASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC50Q8IVM0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 RNU6-1090P-201ENST00000364065 94 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 MIR32-201ENST00000384965 70 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 MTCO3P18-201ENST00000440206 761 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AL353572.1-201ENST00000442490 417 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 RNU7-66P-201ENST00000459469 62 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AL163195.1-201ENST00000496941 348 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AC093852.1-201ENST00000503587 266 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 MTND1P5-201ENST00000517906 940 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AL442163.3-201ENST00000554110 156 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 MIR3937-201ENST00000580135 106 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AL162413.1-201ENST00000603198 110 ntBASIC1.24□□□□□ -2.21
CCDC50Q8IVM0 AF250324.2-201ENST00000608299 610 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms