Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
PRPF39Q86UA1 EBAG9P1-201ENST00000418955 543 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 AL445305.1-201ENST00000432577 575 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 RNU6-498P-201ENST00000459468 107 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 HMGN2P9-201ENST00000476875 229 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 AC010409.1-201ENST00000487382 476 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.92□□□□□ -2.1
PRPF39Q86UA1 SNORA31.17-201ENST00000516953 127 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 RNU6-58P-201ENST00000517143 103 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.92□□□□□ -2.1
PRPF39Q86UA1 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.92□□□□□ -2.1
PRPF39Q86UA1 SNORD11B-201ENST00000607707 90 ntBASIC1.92□□□□□ -2.1
PRPF39Q86UA1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
PRPF39Q86UA1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 MIR586-201ENST00000385035 97 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.91□□□□□ -2.1
PRPF39Q86UA1 USP9YP30-201ENST00000430729 455 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 RNU7-57P-201ENST00000459540 60 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 RNU6-329P-201ENST00000459618 107 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 RPL30P10-201ENST00000488148 337 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 HMGN1P13-201ENST00000505795 138 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AC011712.1-201ENST00000588959 234 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 AC006001.4-201ENST00000622243 395 ntBASIC1.91□□□□□ -2.1
PRPF39Q86UA1 ZNF299P-201ENST00000406845 1804 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RNU6-1059P-201ENST00000363752 98 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 MIR1253-201ENST00000408273 105 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RNU6-57P-201ENST00000411348 103 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC060773.1-201ENST00000421698 310 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC112492.4-201ENST00000456549 352 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RN7SKP210-201ENST00000459176 261 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC069439.1-201ENST00000494739 167 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC018710.1-201ENST00000506509 158 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RNA5SP458-201ENST00000516188 119 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RNA5SP384-201ENST00000516615 116 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AL590705.4-201ENST00000532209 134 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 MIR4742-201ENST00000581069 85 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC060780.3-201ENST00000589464 80 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 AC010900.2-201ENST00000604508 210 ntBASIC1.9□□□□□ -2.11
PRPF39Q86UA1 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 RNU6-280P-201ENST00000364145 104 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 RNU6-596P-201ENST00000365395 98 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 MIR520A-201ENST00000384862 85 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AL356776.1-201ENST00000406574 447 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 CYCSP49-201ENST00000420810 319 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC243428.1-201ENST00000421099 264 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 USMG5P1-201ENST00000425964 177 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC003989.2-201ENST00000440224 169 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.89□□□□□ -2.11
PRPF39Q86UA1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC134698.4-201ENST00000523451 826 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC005668.1-201ENST00000571142 476 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 MIR5696-201ENST00000578474 85 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC103810.8-201ENST00000607347 118 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 AC084782.3-201ENST00000612282 578 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.89□□□□□ -2.11
PRPF39Q86UA1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 RNU6-873P-201ENST00000363833 107 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 RNU6-174P-201ENST00000410406 106 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.619-201ENST00000410951 90 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 MTND3P8-201ENST00000412909 339 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC007098.1-201ENST00000420122 367 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC099677.2-201ENST00000436385 175 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 HMGN2P34-201ENST00000437647 269 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 RPL36AP21-201ENST00000490372 323 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 MTND5P5-201ENST00000503764 376 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 RNU6-358P-201ENST00000516564 75 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 MTND4LP26-201ENST00000518144 282 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC027288.2-201ENST00000553028 243 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.88□□□□□ -2.11
PRPF39Q86UA1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PRPF39Q86UA1 AC010615.1-201ENST00000594254 1764 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU6-661P-201ENST00000362409 107 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.48-201ENST00000362710 103 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU6-137P-201ENST00000363680 108 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 RNU6-414P-201ENST00000363705 104 ntBASIC1.87□□□□□ -2.11
PRPF39Q86UA1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms