Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SNORD11B-201ENST00000607707 90 ntBASIC2□□□□□ -2.09
LDB1Q86U70 AL590240.4-201ENST00000616908 390 ntBASIC2□□□□□ -2.09
LDB1Q86U70 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
LDB1Q86U70 MIR340-201ENST00000362125 95 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 RNU1-62P-201ENST00000362599 164 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 Y_RNA.106-201ENST00000363189 100 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 RNA5SP138-201ENST00000365098 114 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 RNU6-310P-201ENST00000384655 107 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 MIR586-201ENST00000385035 97 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 RNU1-139P-201ENST00000391307 165 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 SNORA75.6-201ENST00000391318 127 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 MTCYBP4-201ENST00000401524 249 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.99□□□□□ -2.09
LDB1Q86U70 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.99□□□□□ -2.09
LDB1Q86U70 USP9YP16-201ENST00000430287 407 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.99□□□□□ -2.09
LDB1Q86U70 AL357134.1-201ENST00000445848 426 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 USP9YP23-201ENST00000455085 407 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.99□□□□□ -2.09
LDB1Q86U70 AC010531.2-201ENST00000465012 153 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 RPS29P21-201ENST00000496272 170 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
LDB1Q86U70 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.99□□□□□ -2.09
LDB1Q86U70 MIR4298-201ENST00000584380 73 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.99□□□□□ -2.09
LDB1Q86U70 AC133104.2-201ENST00000615272 193 ntBASIC1.99□□□□□ -2.09
LDB1Q86U70 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LDB1Q86U70 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.99□□□□□ -2.09
LDB1Q86U70 Y_RNA.70-201ENST00000362886 110 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU6-1305P-201ENST00000364353 104 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.98□□□□□ -2.09
LDB1Q86U70 SNORA67.2-201ENST00000384300 149 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 MIR597-201ENST00000384968 97 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 MIR10B-201ENST00000385011 110 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU6-1304P-201ENST00000411374 106 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 AL445646.1-201ENST00000431784 216 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 AL445305.1-201ENST00000432577 575 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.98□□□□□ -2.09
LDB1Q86U70 AC074290.1-201ENST00000448883 135 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 HMGN2P9-201ENST00000476875 229 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
LDB1Q86U70 AC067942.3-201ENST00000512025 362 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU6-1114P-201ENST00000516022 107 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU2-34P-201ENST00000516534 121 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 RNU6-264P-201ENST00000517134 104 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 AC004584.2-201ENST00000570407 410 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 AL355375.2-201ENST00000574825 175 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 MIR219B-201ENST00000637023 88 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
LDB1Q86U70 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 ZNF702P-202ENST00000434269 1966 ntBASIC1.98□□□□□ -2.09
LDB1Q86U70 MTND4P1-201ENST00000457501 1466 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LDB1Q86U70 Y_RNA.259-201ENST00000364619 101 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 Y_RNA.356-201ENST00000365475 113 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 Y_RNA.364-201ENST00000365532 101 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 RNU6-975P-201ENST00000384296 105 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 SNORA51.11-201ENST00000384442 131 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 Y_RNA.529-201ENST00000384586 119 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LDB1Q86U70 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.97□□□□□ -2.09
LDB1Q86U70 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.97□□□□□ -2.09
LDB1Q86U70 RPL30P15-201ENST00000457129 321 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 RNU6-948P-201ENST00000516374 107 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 RNU1-117P-201ENST00000517041 158 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.97□□□□□ -2.09
LDB1Q86U70 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.97□□□□□ -2.09
LDB1Q86U70 MIR5695-201ENST00000579717 85 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.97□□□□□ -2.09
LDB1Q86U70 AC005296.1-201ENST00000616145 209 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 U1.36-201ENST00000620684 176 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AL078596.1-201ENST00000624856 447 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AC008873.1-201ENST00000625051 138 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LDB1Q86U70 MTND5P16-201ENST00000460269 1703 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 AC009487.4-201ENST00000624969 3585 ntBASIC1.97□□□□□ -2.09
LDB1Q86U70 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.09
LDB1Q86U70 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.96□□□□□ -2.1
LDB1Q86U70 RNU6-222P-201ENST00000362438 107 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 Y_RNA.179-201ENST00000363844 90 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 RNU6-418P-201ENST00000384035 107 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 RNU6-890P-201ENST00000384121 107 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 RNU6-793P-201ENST00000384233 104 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AL512604.1-201ENST00000404812 257 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AC092423.1-201ENST00000430165 186 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 MTCO3P10-201ENST00000455912 772 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 RNU7-87P-201ENST00000459343 62 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AC022493.2-201ENST00000506122 481 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.96□□□□□ -2.1
LDB1Q86U70 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
LDB1Q86U70 SUB1P3-201ENST00000564581 315 ntBASIC1.96□□□□□ -2.1
LDB1Q86U70 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.96□□□□□ -2.1
LDB1Q86U70 AC090617.3-201ENST00000573670 475 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms