Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CBX3P9-201ENST00000402326 552 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU2-25P-201ENST00000411041 191 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-847P-201ENST00000411115 108 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 SNORA31.6-201ENST00000516241 130 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 AC023824.2-201ENST00000566185 400 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 ZNF658B-202ENST00000615961 3375 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 AC016717.2-201ENST00000609089 5141 ntBASIC2.99□□□□□ -1.93
UBE3BQ7Z3V4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.14-201ENST00000362415 103 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-245P-201ENST00000384020 107 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 AL513477.1-202ENST00000417061 214 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 Z98742.3-201ENST00000418637 326 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 UBBP3-201ENST00000445497 241 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 AC112771.1-201ENST00000463581 102 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RPL36AP48-201ENST00000485521 314 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RPS23P5-201ENST00000495419 428 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RNA5SP281-201ENST00000516504 135 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-570P-201ENST00000517051 105 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 AP001282.2-201ENST00000616149 309 ntBASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.98□□□□□ -1.93
UBE3BQ7Z3V4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AL359854.1-201ENST00000614203 1594 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MIR335-201ENST00000362173 94 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 RNU4-15P-201ENST00000362613 141 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-655P-201ENST00000362858 107 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 SNORD81.1-201ENST00000363064 77 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MIR215-201ENST00000384858 110 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 RNU6-907P-201ENST00000390924 102 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 Y_RNA.581-201ENST00000391017 97 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MIR208B-201ENST00000401172 77 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 RNU2-38P-201ENST00000410856 79 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AC096920.1-201ENST00000423991 241 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AC007395.1-201ENST00000451333 677 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MTND1P19-201ENST00000511780 315 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MIR4423-201ENST00000580922 80 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 AC090425.1-201ENST00000610007 140 ntBASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
UBE3BQ7Z3V4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 SNORA70B-201ENST00000384210 135 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-378P-201ENST00000384324 107 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 AC005002.2-201ENST00000438228 269 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 RPL31P41-201ENST00000477967 372 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 Y_RNA.680-201ENST00000516441 93 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 CYCSP23-201ENST00000519781 313 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 MIR3668-201ENST00000582138 75 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 AC010999.1-201ENST00000611856 324 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 ZNF204P-201ENST00000416749 2397 ntBASIC2.96□□□□□ -1.94
UBE3BQ7Z3V4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-926P-201ENST00000384075 107 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-937P-201ENST00000384325 106 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 FO393413.1-201ENST00000402892 195 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RN7SKP284-201ENST00000411002 343 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AC097463.2-201ENST00000421074 142 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AL445305.1-201ENST00000432577 575 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RPL39P38-201ENST00000467018 153 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-496P-201ENST00000516145 99 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 SNORA25.14-201ENST00000516481 132 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AK6P2-201ENST00000549020 471 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AC067747.1-201ENST00000608026 250 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 SDR42E1P4-201ENST00000620894 481 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AC010297.1-201ENST00000623948 149 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AC007336.1-201ENST00000576365 3828 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
UBE3BQ7Z3V4 RNU6-1083P-201ENST00000384022 107 ntBASIC2.94□□□□□ -1.94
UBE3BQ7Z3V4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.94□□□□□ -1.94
UBE3BQ7Z3V4 EIF4EP4-201ENST00000424916 578 ntBASIC2.94□□□□□ -1.94
UBE3BQ7Z3V4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms