Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL049545.1-201ENST00000401856 572 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 MTCO2P19-201ENST00000427513 598 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 MTND3P9-201ENST00000429526 346 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC073464.1-201ENST00000429823 534 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 TPTE2P5-203ENST00000458118 728 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 RNU7-34P-201ENST00000459394 64 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 RNA5SP220-201ENST00000516298 104 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC011604.1-201ENST00000545978 196 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC087752.4-201ENST00000605911 462 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 AL354950.2-201ENST00000617939 290 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC137590.2-201ENST00000619709 240 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC008873.1-201ENST00000625051 138 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 AC068647.2-201ENST00000637380 353 ntBASIC0.72□□□□□ -2.29
SCXQ7RTU7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
SCXQ7RTU7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SCXQ7RTU7 Y_RNA.169-201ENST00000363745 96 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNU6-1317P-201ENST00000364582 104 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNU1-93P-201ENST00000364704 169 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNA5SP259-201ENST00000365541 109 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNU6-417P-201ENST00000384712 107 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 MIR320B2-201ENST00000408479 138 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNU7-57P-201ENST00000459540 60 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RPL39P38-201ENST00000467018 153 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 AF186996.7-201ENST00000492781 209 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 HMGB1P29-201ENST00000505659 499 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 UBL5P1-201ENST00000507979 193 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 RNU6-344P-201ENST00000516635 111 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 TPRKBP2-201ENST00000565969 475 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 CPDP1-201ENST00000579660 283 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 Z99497.2-201ENST00000603634 310 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 AC021506.2-201ENST00000612354 169 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 snoZ196.1-201ENST00000625269 89 ntBASIC0.71□□□□□ -2.3
SCXQ7RTU7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.71□□□□□ -2.3
SCXQ7RTU7 Y_RNA.123-201ENST00000363338 102 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNU6-42P-201ENST00000384165 107 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNU6-784P-201ENST00000384330 106 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNU6-1031P-201ENST00000384773 107 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNA5SP467-201ENST00000391274 118 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 MIR1253-201ENST00000408273 105 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RN7SKP142-201ENST00000411236 328 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC016909.1-201ENST00000415916 166 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC008134.1-201ENST00000420943 193 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 AL359672.1-201ENST00000442302 409 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RNU6-221P-201ENST00000459541 99 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RPS29P1-201ENST00000465274 159 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 SNORA40.12-201ENST00000516329 111 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC025647.1-201ENST00000517879 253 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 CYCSP23-201ENST00000519781 313 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 MRPS36P4-201ENST00000534436 298 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 AL157687.1-201ENST00000554853 619 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 FAM106DP-201ENST00000586416 501 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AL929325.1-201ENST00000603096 117 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 MIR8076-201ENST00000611401 83 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 RMST_2.1-201ENST00000617263 136 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 AC006001.4-201ENST00000622243 395 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 FER-210ENST00000628534 558 ntTSL 5 BASIC0.7□□□□□ -2.3
SCXQ7RTU7 SCARNA4-201ENST00000629045 128 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 OR5AK4P-201ENST00000635912 903 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 U6.108-201ENST00000637764 58 ntBASIC0.7□□□□□ -2.3
SCXQ7RTU7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SCXQ7RTU7 MIR222-201ENST00000384992 110 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 RNA5SP109-201ENST00000391010 116 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 RNU6-57P-201ENST00000411348 103 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AL353193.1-201ENST00000421444 268 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AL591704.2-201ENST00000421658 181 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.69□□□□□ -2.3
SCXQ7RTU7 USP9YP29-201ENST00000445112 563 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.69□□□□□ -2.3
SCXQ7RTU7 HSPE1P13-201ENST00000451143 297 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.69□□□□□ -2.3
SCXQ7RTU7 AC091885.1-201ENST00000506658 268 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 RNU6-165P-201ENST00000517170 99 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.69□□□□□ -2.3
SCXQ7RTU7 LRRC34P1-201ENST00000542742 915 ntBASIC0.69□□□□□ -2.3
SCXQ7RTU7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.69□□□□□ -2.3
SCXQ7RTU7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms