Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SNORA70.24-201ENST00000517233 118 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 MIR4659A-201ENST00000580269 81 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AL355297.3-201ENST00000604082 446 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 RAC1P9-201ENST00000604990 392 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AL121655.1-201ENST00000605811 308 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 SNORD11B-201ENST00000607707 90 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AL021879.1-201ENST00000611756 288 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AC240442.1-201ENST00000616055 283 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 U4atac.1-201ENST00000618345 95 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 AC080100.1-201ENST00000624239 5356 ntBASIC2.21□□□□□ -2.06
SHFQ7M4L6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHFQ7M4L6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHFQ7M4L6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
SHFQ7M4L6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.2□□□□□ -2.06
SHFQ7M4L6 RNU6-545P-201ENST00000362681 104 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 SNORA63.7-201ENST00000365579 123 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 MIR27B-201ENST00000385129 97 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 snosnR66.1-201ENST00000391095 99 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC107083.1-201ENST00000439643 279 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.2□□□□□ -2.06
SHFQ7M4L6 PCNPP5-201ENST00000452246 481 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 SNORD109B-201ENST00000458961 67 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 SNORD109A-201ENST00000459128 67 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 MTATP8P1-201ENST00000467115 207 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.2□□□□□ -2.06
SHFQ7M4L6 SLC25A15P5-201ENST00000508033 253 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 RNU1-117P-201ENST00000517041 158 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 RNU6-667P-201ENST00000517186 102 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 RNU1-104P-201ENST00000517280 175 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC131281.1-201ENST00000522984 164 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AK6P2-201ENST00000549020 471 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC010205.1-201ENST00000616668 449 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC068205.3-201ENST00000636385 468 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.2□□□□□ -2.06
SHFQ7M4L6 AC135776.4-201ENST00000624300 1904 ntBASIC2.2□□□□□ -2.06
SHFQ7M4L6 RNU6-961P-201ENST00000363893 105 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 SNORD87-201ENST00000364849 89 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 Y_RNA.459-201ENST00000384251 102 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 MRPL35P1-201ENST00000404272 572 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHFQ7M4L6 MIR548F4-201ENST00000408515 105 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 ELOCP21-201ENST00000412558 336 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.19□□□□□ -2.06
SHFQ7M4L6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.19□□□□□ -2.06
SHFQ7M4L6 DPH3P2-201ENST00000422618 250 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 UQCRBP2-201ENST00000447827 297 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 HMGN2P18-201ENST00000450680 270 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 RN7SKP132-201ENST00000516001 208 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 RNU6-397P-201ENST00000516226 104 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 MIR4658-201ENST00000584344 65 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 AC008873.1-201ENST00000625051 138 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.19□□□□□ -2.06
SHFQ7M4L6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.19□□□□□ -2.06
SHFQ7M4L6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SHFQ7M4L6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHFQ7M4L6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHFQ7M4L6 AC005336.3-201ENST00000623833 2679 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 SNORD31B-201ENST00000364977 69 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 RNU6-611P-201ENST00000384276 104 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AL079342.1-201ENST00000401460 267 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 AL358176.2-201ENST00000425769 204 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC009238.1-201ENST00000442165 424 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC073910.1-201ENST00000445047 438 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC009237.6-201ENST00000446969 424 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 HMGN1P10-201ENST00000474557 553 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 HMGN2P9-201ENST00000476875 229 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 MRPS35P2-201ENST00000508242 191 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 CYCSP23-201ENST00000519781 313 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AC233702.2-202ENST00000562547 291 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.18□□□□□ -2.06
SHFQ7M4L6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.18□□□□□ -2.06
SHFQ7M4L6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNU6-1026P-201ENST00000384465 108 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 MIR586-201ENST00000385035 97 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AL357139.1-201ENST00000407792 426 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNU2-52P-201ENST00000410680 190 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC063976.3-201ENST00000426849 329 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.17□□□□□ -2.06
SHFQ7M4L6 AL513328.1-201ENST00000446460 224 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC016925.1-201ENST00000458303 298 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC074133.1-201ENST00000515696 183 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNU6-408P-201ENST00000515910 100 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNU6-991P-201ENST00000516168 107 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNU6-897P-201ENST00000517135 105 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 RNA5SP490-201ENST00000517141 136 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 NDUFA5P6-201ENST00000542110 379 ntBASIC2.17□□□□□ -2.06
SHFQ7M4L6 AC018448.1-201ENST00000552843 316 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms