Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 AC020661.2-201ENST00000560114 134 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 MIR4272-201ENST00000635924 64 ntBASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.46□□□□□ -2.02
SYNE3Q6ZMZ3 ZNF204P-201ENST00000416749 2397 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU1-62P-201ENST00000362599 164 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-694P-201ENST00000364071 147 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA18.2-201ENST00000383865 132 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA67.2-201ENST00000384300 149 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNY1P14-201ENST00000384426 108 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA69.1-201ENST00000390904 137 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MIR548P-201ENST00000408336 84 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MIR320B2-201ENST00000408479 138 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 U3.40-201ENST00000408706 208 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SKP223-201ENST00000410582 62 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MTCO2P12-201ENST00000427426 682 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 CHEK2P4-201ENST00000450340 246 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 AC007395.1-201ENST00000451333 677 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MTCO3P8-201ENST00000453691 755 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 AC016925.1-201ENST00000458303 298 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 ATP5EP1-201ENST00000510257 156 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-475P-201ENST00000516073 104 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MIR514B-201ENST00000516774 80 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU1-40P-201ENST00000516816 164 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU1-97P-201ENST00000516872 164 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.711-201ENST00000516993 102 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 CYCSP26-201ENST00000534107 320 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 UBL5P4-201ENST00000562584 236 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MIR5002-201ENST00000584713 97 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 AC022140.2-201ENST00000623500 188 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 MIR219B-201ENST00000637023 88 ntBASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SYNE3Q6ZMZ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA51.11-201ENST00000384442 131 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-541P-201ENST00000384709 110 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SKP192-201ENST00000411291 327 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 SRIP3-201ENST00000413200 219 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC027124.2-201ENST00000428249 105 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC004386.2-201ENST00000441858 148 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 U8.22-201ENST00000459141 133 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC107032.1-201ENST00000485945 480 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC090255.1-201ENST00000495779 349 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 RNU4-77P-201ENST00000516692 156 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC144568.1-201ENST00000520139 137 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AC013412.1-201ENST00000610687 192 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 AL138825.1-201ENST00000618587 192 ntBASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SYNE3Q6ZMZ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.445-201ENST00000384168 102 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 SNORA64-201ENST00000384674 134 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 AL357139.1-201ENST00000407792 426 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RNA5SP504-201ENST00000410676 117 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 MCFD2P1-201ENST00000417812 300 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SL429P-201ENST00000479090 223 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SL489P-201ENST00000486185 223 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SL327P-201ENST00000488659 223 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RPS23P5-201ENST00000495419 428 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 MIR449C-201ENST00000516047 92 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-965P-201ENST00000516721 96 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SL853P-201ENST00000617250 223 ntBASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 U8.2-201ENST00000363156 134 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 SNORD31B-201ENST00000364977 69 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNY3P4-201ENST00000384428 101 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MIR549A-201ENST00000385268 96 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MIR1302-11-201ENST00000408051 138 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MIR1302-9-201ENST00000408365 138 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MIR1302-10-201ENST00000408734 138 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 MTND4P19-201ENST00000446659 478 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 AC112492.4-201ENST00000456549 352 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 AC025033.1-201ENST00000463883 194 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 AC093259.1-201ENST00000509755 300 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNU1-41P-201ENST00000516161 162 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNU1-48P-201ENST00000516400 162 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNU2-44P-201ENST00000516795 194 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.42□□□□□ -2.02
SYNE3Q6ZMZ3 RN7SKP295-201ENST00000517264 153 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms