Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC005562.2-201ENST00000618264 111 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.387-201ENST00000383918 102 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 SNORA48.1-201ENST00000390879 135 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AL139156.1-201ENST00000412785 841 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 DPH3P2-201ENST00000422618 250 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AC005534.2-201ENST00000431047 433 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AL445646.1-201ENST00000431784 216 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 MTND1P17-201ENST00000448961 204 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 MTCO3P10-201ENST00000455912 772 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 RPS29P21-201ENST00000496272 170 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-559P-201ENST00000516151 98 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-566P-201ENST00000516790 107 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP454-201ENST00000517231 127 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 MIR4713-201ENST00000582691 75 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 MIR4753-201ENST00000585119 83 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AC023043.2-201ENST00000589678 1026 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AL133215.3-201ENST00000609801 448 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 TCL6_2.1-201ENST00000615162 119 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 AC126177.8-201ENST00000618339 1015 ntBASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NHLRC1Q6VVB1 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 SNORD116-11-201ENST00000383882 92 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-308P-201ENST00000390957 107 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNY4P36-201ENST00000391116 96 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR1302-11-201ENST00000408051 138 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR1302-9-201ENST00000408365 138 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR1302-10-201ENST00000408734 138 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP501-201ENST00000410990 112 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Z82205.1-201ENST00000428456 297 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 OR2AQ1P-201ENST00000451972 200 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNU2-34P-201ENST00000516534 121 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MRPS36P4-201ENST00000534436 298 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 AC005668.1-201ENST00000571142 476 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR3171-201ENST00000584270 74 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 AL360085.1-201ENST00000604713 532 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR1302-2-201ENST00000607096 138 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.812-201ENST00000610788 101 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.784-201ENST00000613803 101 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.787-201ENST00000616522 101 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.780-201ENST00000617336 101 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.801-201ENST00000619005 101 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 MIR219B-201ENST00000637023 88 ntBASIC1.84□□□□□ -2.11
NHLRC1Q6VVB1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 SNORA63C-201ENST00000364578 129 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AL079342.1-201ENST00000401460 267 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-370P-201ENST00000411008 104 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 MTND2P23-201ENST00000422990 651 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 PMCHL1-202ENST00000423102 261 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC096638.1-201ENST00000444678 216 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC016925.1-201ENST00000458303 298 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 snoU13.23-201ENST00000458863 104 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 TOMM22P6-201ENST00000465035 409 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC027575.1-201ENST00000481064 460 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-120P-201ENST00000516077 103 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 MIR4790-201ENST00000577799 79 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 MIR5089-201ENST00000580047 84 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AL080274.1-201ENST00000605565 220 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AL590240.4-201ENST00000616908 390 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 AC098657.3-201ENST00000620434 263 ntBASIC1.83□□□□□ -2.12
NHLRC1Q6VVB1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 RNU5F-3P-201ENST00000363767 117 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 RNU6-1188P-201ENST00000363795 107 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 MIR548P-201ENST00000408336 84 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 EBAG9P1-201ENST00000418955 543 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 AC139712.2-201ENST00000424302 339 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 snoU13.6-201ENST00000458785 104 ntBASIC1.82□□□□□ -2.12
NHLRC1Q6VVB1 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms