Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR7106-201ENST00000612419 65 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 AC083806.3-201ENST00000614016 455 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 U6.92-201ENST00000636464 89 ntBASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.63□□□□□ -1.99
PPP4R4Q6NUP7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AC005592.1-201ENST00000566527 1640 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MIR26A1-201ENST00000362205 77 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 DEFA7P-201ENST00000382676 285 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MIR548B-201ENST00000385247 97 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AL355497.1-201ENST00000406262 551 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 SNORD12B-201ENST00000410433 91 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 HMGN2P3-201ENST00000433603 273 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 HMGN2P5-201ENST00000436882 273 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MTND2P29-201ENST00000438595 412 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AP001486.1-201ENST00000463339 476 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-1012P-201ENST00000516606 109 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 RNA5SP82-201ENST00000516707 92 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AP002001.1-203ENST00000534002 267 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 MIR3169-201ENST00000578032 83 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
PPP4R4Q6NUP7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 MTND4P1-201ENST00000457501 1466 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 RNA5SP493-201ENST00000364115 91 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-418P-201ENST00000384035 107 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-975P-201ENST00000384296 105 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 MIR628-201ENST00000385229 95 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 RNU11-3P-201ENST00000391111 133 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC139712.2-201ENST00000424302 339 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC016717.1-201ENST00000448918 286 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 RPS29P26-201ENST00000477483 171 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AL049873.1-201ENST00000480540 376 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 SNORA40.9-201ENST00000515895 93 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 SNORA25.10-201ENST00000515926 124 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC091144.1-201ENST00000519573 138 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 GNAI2P1-201ENST00000541815 315 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 EIF4BP1-201ENST00000554881 351 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC104695.3-201ENST00000604052 296 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC130454.1-201ENST00000622948 401 ntBASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PPP4R4Q6NUP7 AC009487.4-201ENST00000624969 3585 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 Y_RNA.326-201ENST00000365176 113 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AC096920.1-201ENST00000423991 241 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 NDUFB4P10-201ENST00000452541 359 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-1137P-201ENST00000517073 99 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AP003072.1-201ENST00000531740 145 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 MIR4513-201ENST00000581077 86 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AL590240.4-201ENST00000616908 390 ntBASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-23P-201ENST00000363283 107 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 SNORA5B-201ENST00000363786 132 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 MRPL42P3-201ENST00000401492 326 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AL357134.1-201ENST00000445848 426 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AC067942.3-201ENST00000512025 362 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 RNU6-988P-201ENST00000519081 107 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 MIR4753-201ENST00000585119 83 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AC022432.1-201ENST00000595739 310 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AL138825.1-201ENST00000618587 192 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AC022513.1-201ENST00000624512 117 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AL078596.1-201ENST00000624856 447 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 AC096644.4-201ENST00000563417 2912 ntBASIC2.59□□□□□ -1.99
PPP4R4Q6NUP7 U3.8-201ENST00000363675 217 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 RNU6-961P-201ENST00000363893 105 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 SNORA33.2-201ENST00000365413 134 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 MIR597-201ENST00000384968 97 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 UQCRBP2-201ENST00000447827 297 ntBASIC2.58□□□□□ -2
PPP4R4Q6NUP7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.58□□□□□ -2
PPP4R4Q6NUP7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms