Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
ATL3Q6DD88 MIR378A-201ENST00000362177 66 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 RNU6-862P-201ENST00000362804 105 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 Y_RNA.132-201ENST00000363421 102 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 RNY4P14-201ENST00000363656 96 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 RNU6-439P-201ENST00000384188 106 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 Y_RNA.530-201ENST00000384587 101 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 MIR150-201ENST00000385048 84 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.41□□□□□ -2.18
ATL3Q6DD88 MTCO3P8-201ENST00000453691 755 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.41□□□□□ -2.18
ATL3Q6DD88 AC091435.1-201ENST00000505442 584 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 AC016957.1-201ENST00000534895 309 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 RRN3P3-201ENST00000549207 578 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 SNORA77B-201ENST00000578179 125 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 SNORA59B-202ENST00000578183 701 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 AP000907.4-201ENST00000604143 237 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 AL359697.1-201ENST00000624879 587 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 BX322639.1-202ENST00000423987 2213 ntBASIC1.41□□□□□ -2.18
ATL3Q6DD88 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.41□□□□□ -2.18
ATL3Q6DD88 SNORD33-201ENST00000362761 85 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6-623P-201ENST00000363143 105 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 Y_RNA.118-201ENST00000363300 101 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6-877P-201ENST00000383868 107 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6-1026P-201ENST00000384465 108 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 MIR520A-201ENST00000384862 85 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 MIR487A-201ENST00000385009 80 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 MIR1267-201ENST00000408723 78 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 AL590632.1-201ENST00000424289 371 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 MTCO3P18-201ENST00000440206 761 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC009237.7-201ENST00000447357 229 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 ATP5J2P3-201ENST00000451550 258 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 HMGN2P9-201ENST00000476875 229 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6-720P-201ENST00000516363 108 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNA5SP384-201ENST00000516615 116 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNA5SP481-201ENST00000516814 122 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 MTND1P35-201ENST00000526739 508 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 TPRKBP2-201ENST00000565969 475 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 MIR5006-201ENST00000583027 110 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC073413.2-201ENST00000604332 360 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC069114.2-201ENST00000604699 304 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC083806.3-201ENST00000614016 455 ntBASIC1.4□□□□□ -2.19
ATL3Q6DD88 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.4□□□□□ -2.19
ATL3Q6DD88 RNU6-1252P-201ENST00000363054 104 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RNU4-40P-201ENST00000364351 143 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 Y_RNA.318-201ENST00000365131 97 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 Y_RNA.402-201ENST00000383972 102 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RNU6-975P-201ENST00000384296 105 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RPL30P13-201ENST00000418873 348 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.39□□□□□ -2.19
ATL3Q6DD88 AL589823.1-201ENST00000429577 183 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RPL26P26-201ENST00000480251 434 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 TRBVA-201ENST00000498804 316 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RNU6-948P-201ENST00000516374 107 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 RNU6-256P-201ENST00000516747 97 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 AC109635.3-201ENST00000529536 185 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 AC084364.2-201ENST00000546924 395 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 SUB1P3-201ENST00000564581 315 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.39□□□□□ -2.19
ATL3Q6DD88 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.39□□□□□ -2.19
ATL3Q6DD88 AC097065.2-201ENST00000608159 533 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.39□□□□□ -2.19
ATL3Q6DD88 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
ATL3Q6DD88 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ATL3Q6DD88 SNORD115-8-201ENST00000363856 82 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 SNORA63D-201ENST00000364359 132 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 SNORD115-38-201ENST00000365037 82 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 RPL21P111-201ENST00000418453 477 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 AC092473.1-201ENST00000441098 221 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 AC069257.2-201ENST00000441819 155 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 NFU1P2-201ENST00000448700 469 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 PCMTD1P1-201ENST00000455560 355 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 RPS29P25-201ENST00000481709 171 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 MTCO2P30-201ENST00000503662 364 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 AC011406.1-201ENST00000512440 370 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 RNU6-1041P-201ENST00000516254 102 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 RNU2-34P-201ENST00000516534 121 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
ATL3Q6DD88 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.38□□□□□ -2.19
ATL3Q6DD88 MIR4781-201ENST00000585250 76 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms