Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU1-143P-201ENST00000516296 146 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 RNY3P16-201ENST00000516338 101 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 U1.23-201ENST00000610293 146 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 RNU1-68P-201ENST00000615382 146 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 U1.39-201ENST00000621562 146 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 PWAR6-201ENST00000552334 4618 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.121-201ENST00000363309 113 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 U3.8-201ENST00000363675 217 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 MIR548I2-201ENST00000408348 149 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 BTF3P11-201ENST00000426582 477 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 RN7SL442P-201ENST00000473804 320 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 RNU6-1219P-201ENST00000516143 112 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 MIR4319-201ENST00000577285 85 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 MIR3945-201ENST00000581853 98 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 ELOCP29-201ENST00000588193 334 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 AL008718.3-201ENST00000610217 321 ntBASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
USPL1Q5W0Q7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 RNU6-324P-201ENST00000363957 106 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 RNU6-454P-201ENST00000364292 107 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.571-201ENST00000384753 98 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 RNU2-44P-201ENST00000516795 194 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 MIR3684-201ENST00000579779 74 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AL136360.1-201ENST00000503377 1900 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 AC093908.1-201ENST00000623125 8092 ntBASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
USPL1Q5W0Q7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.7-201ENST00000362352 102 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 RNU6-312P-201ENST00000364629 107 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 SNORA18.2-201ENST00000383865 132 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AC105272.1-201ENST00000438604 198 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AC112771.1-201ENST00000463581 102 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AC005840.1-201ENST00000498412 377 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 RNU6-711P-201ENST00000517255 106 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AC136628.3-201ENST00000521868 290 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AC008873.1-201ENST00000625051 138 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 MTND1P7-201ENST00000632801 297 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 AP003122.5-201ENST00000527668 3766 ntBASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
USPL1Q5W0Q7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 SNORD115-30-201ENST00000364117 82 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.243-201ENST00000364481 109 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 RNU4-17P-201ENST00000365598 141 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.580-201ENST00000391004 95 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 RNU6-1135P-201ENST00000411083 103 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 AC004866.1-201ENST00000411748 78 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 AL139281.1-201ENST00000422120 335 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 AL031183.1-201ENST00000457667 207 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 SRIP1-201ENST00000489235 288 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 DEFB131C-201ENST00000528817 165 ntBASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.85□□□□□ -1.79
USPL1Q5W0Q7 RNU6-704P-201ENST00000364162 103 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 RNA5SP240-201ENST00000365355 128 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 SNORA67.2-201ENST00000384300 149 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 MIR29B2-201ENST00000385055 81 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 MIR767-201ENST00000390228 109 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 RNA5SP504-201ENST00000410676 117 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 AL451074.5-201ENST00000415894 435 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 AC097463.2-201ENST00000421074 142 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 RNU7-170P-201ENST00000459303 61 ntBASIC3.84□□□□□ -1.79
USPL1Q5W0Q7 HMGB3P3-201ENST00000510526 400 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms