Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AC087588.2-201ENST00000617667 426 ntBASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
LRIF1Q5T3J3 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 MIR340-201ENST00000362125 95 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 RNU6-525P-201ENST00000363685 104 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.428-201ENST00000384078 102 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.460-201ENST00000384255 102 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 RNU6-975P-201ENST00000384296 105 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.579-201ENST00000390939 94 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AL033519.2-201ENST00000403958 392 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AC091179.3-201ENST00000474761 144 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 RNU6-911P-201ENST00000516523 104 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AC074050.1-201ENST00000563247 211 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AL078596.1-201ENST00000624856 447 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
LRIF1Q5T3J3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 U3.8-201ENST00000363675 217 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.197-201ENST00000364004 102 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RNA5SP493-201ENST00000364115 91 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.252-201ENST00000364556 101 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 SNORA6-201ENST00000384033 151 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RNU6-1235P-201ENST00000384559 107 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 MIR329-1-201ENST00000385028 80 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 MIR1283-2-201ENST00000408621 87 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RNA5SP504-201ENST00000410676 117 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC139712.2-201ENST00000424302 339 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AL445305.1-201ENST00000432577 575 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RNU6-498P-201ENST00000459468 107 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC010531.2-201ENST00000465012 153 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC027575.1-201ENST00000481064 460 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC105758.1-201ENST00000506038 399 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 RN7SKP49-201ENST00000516675 260 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 SNORD116.3-201ENST00000517176 78 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC125232.2-201ENST00000592457 143 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AL050343.2-201ENST00000607338 280 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 AC091925.1-201ENST00000623204 462 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 MTND5P35-201ENST00000557537 1720 ntBASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.05□□□□□ -2.08
LRIF1Q5T3J3 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 SNORD114-6-201ENST00000364393 72 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.314-201ENST00000365114 102 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 RPS20P15-201ENST00000412792 311 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 BX510359.4-201ENST00000423750 193 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 MTND2P29-201ENST00000438595 412 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 RNU6-717P-201ENST00000459076 104 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AL080274.1-201ENST00000605565 220 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AC090574.1-201ENST00000623186 233 ntBASIC2.04□□□□□ -2.08
LRIF1Q5T3J3 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU6-23P-201ENST00000363283 107 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU6-879P-201ENST00000364328 108 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU1-115P-201ENST00000365329 160 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.395-201ENST00000383945 109 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU6-301P-201ENST00000384277 107 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 Y_RNA.605-201ENST00000410577 105 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 AC010095.1-201ENST00000443543 144 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 AC007677.1-201ENST00000445757 515 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RPL23AP7-203ENST00000449021 469 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 AL021397.1-201ENST00000451806 248 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 U8.22-201ENST00000459141 133 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 HMGN1P13-201ENST00000505795 138 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 AC074133.1-201ENST00000515696 183 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU6-856P-201ENST00000516959 98 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 RNU1-117P-201ENST00000517041 158 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 AC022868.1-201ENST00000517767 391 ntBASIC2.03□□□□□ -2.08
LRIF1Q5T3J3 MIR3169-201ENST00000578032 83 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms