Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 AC010469.2-201ENST00000496412 480 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 IGLV3-17-201ENST00000519099 244 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 HSBP1P1-201ENST00000555205 166 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 AC016925.2-201ENST00000605108 242 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 U6.92-201ENST00000636464 89 ntBASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RUNDC3AQ59EK9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.27-201ENST00000362540 103 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.202-201ENST00000364083 110 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.326-201ENST00000365176 113 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 SNORA33.2-201ENST00000365413 134 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-438P-201ENST00000365561 103 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 MRPL42P3-201ENST00000401492 326 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 AC023442.1-201ENST00000531247 422 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 ELOCP29-201ENST00000588193 334 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 AC040896.1-201ENST00000613819 479 ntBASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.31□□□□□ -2.04
RUNDC3AQ59EK9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-859P-201ENST00000362728 107 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.99-201ENST00000363138 105 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 SNORD14D-201ENST00000384390 87 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 MTCO3P19-201ENST00000415864 321 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC123900.1-201ENST00000420390 96 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC010531.2-201ENST00000465012 153 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-1012P-201ENST00000516606 109 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 MIR4753-201ENST00000585119 83 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AL031274.2-201ENST00000599419 203 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 AC104695.3-201ENST00000604052 296 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RUNDC3AQ59EK9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 RNU1-51P-201ENST00000365345 176 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-926P-201ENST00000384075 107 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SNORD78.2-201ENST00000391076 69 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 ELOCP21-201ENST00000412558 336 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 MTCO1P44-201ENST00000441935 243 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 UQCRBP2-201ENST00000447827 297 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SNORD109B-201ENST00000458961 67 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SNORD109A-201ENST00000459128 67 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AC107222.1-201ENST00000510899 637 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SNORA40.9-201ENST00000515895 93 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AC040926.1-201ENST00000530195 238 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AC067747.1-201ENST00000608026 250 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 U4.3-201ENST00000621047 82 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 AL078596.1-201ENST00000624856 447 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RUNDC3AQ59EK9 SNORA63-201ENST00000363450 132 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-1164P-201ENST00000364428 107 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-975P-201ENST00000384296 105 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 MIR196B-201ENST00000384852 84 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 MIR548B-201ENST00000385247 97 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC139712.2-201ENST00000424302 339 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 PCNPP5-201ENST00000452246 481 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 RPL26P26-201ENST00000480251 434 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC093852.1-201ENST00000503587 266 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 RNU6-1137P-201ENST00000517073 99 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC087441.2-201ENST00000529141 262 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 MIR4319-201ENST00000577285 85 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 MIR4680-201ENST00000580906 66 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC022432.1-201ENST00000595739 310 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 AC011476.5-201ENST00000615594 130 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.28□□□□□ -2.04
RUNDC3AQ59EK9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 472.5 ms