| CRY2 | Q49AN0 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ZNF204P-201 | ENST00000416749 | 2397 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL391987.6-201 | ENST00000305671 | 199 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | CBX3P1-201 | ENST00000325243 | 554 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU4-13P-201 | ENST00000364019 | 141 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | Y_RNA.301-201 | ENST00000364990 | 103 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SNORA8-201 | ENST00000384574 | 139 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-541P-201 | ENST00000384709 | 110 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | TRAJ11-201 | ENST00000390526 | 60 nt | APPRIS P1 BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR1276-201 | ENST00000408707 | 83 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC079150.1-201 | ENST00000413043 | 383 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTND1P23-201 | ENST00000416931 | 372 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | ATP6V0E1P3-201 | ENST00000420036 | 246 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MTCO3P8-201 | ENST00000453691 | 755 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-329P-201 | ENST00000459618 | 107 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | FO393415.2-201 | ENST00000480085 | 343 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC069439.1-201 | ENST00000494739 | 167 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC018710.1-201 | ENST00000506509 | 158 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MRPS17P9-201 | ENST00000511924 | 393 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNU6-358P-201 | ENST00000516564 | 75 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | RNA5SP54-201 | ENST00000516951 | 92 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | SUMO2P18-201 | ENST00000518873 | 252 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | DEFB131C-201 | ENST00000528817 | 165 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC027018.1-202 | ENST00000534723 | 383 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC084816.1-207 | ENST00000538317 | 584 nt | TSL 4 BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC002558.3-201 | ENST00000574021 | 401 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC005786.1-201 | ENST00000588553 | 154 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AC005296.1-201 | ENST00000616145 | 209 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| CRY2 | Q49AN0 | AL159152.1-201 | ENST00000635019 | 2587 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AL353148.1-201 | ENST00000449761 | 463 nt | TSL 2 BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC009474.2-201 | ENST00000451383 | 136 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | snoU13.30-201 | ENST00000458951 | 104 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | LINC02233-201 | ENST00000513718 | 358 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RRN3P3-201 | ENST00000549207 | 578 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | ACTG1P17-203 | ENST00000561222 | 537 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC060780.3-201 | ENST00000589464 | 80 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | CERS6-AS1-202 | ENST00000594898 | 499 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AL109918.3-201 | ENST00000603072 | 338 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC084782.3-201 | ENST00000612282 | 578 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC083806.3-201 | ENST00000614016 | 455 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MTND4P1-201 | ENST00000457501 | 1466 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | SENP7-201 | ENST00000314261 | 4736 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Y_RNA.116-201 | ENST00000363292 | 103 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Y_RNA.505-201 | ENST00000384489 | 102 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR153-2-201 | ENST00000385225 | 87 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | SNORA48.1-201 | ENST00000390879 | 135 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR1323-201 | ENST00000408090 | 73 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RN7SKP101-201 | ENST00000411376 | 320 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MTND3P8-201 | ENST00000412909 | 339 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | PLCL2-AS1-201 | ENST00000414844 | 311 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Z82188.1-201 | ENST00000436709 | 154 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AL138799.4-201 | ENST00000443939 | 643 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC009237.7-201 | ENST00000447357 | 229 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MTND1P17-201 | ENST00000448961 | 204 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC114982.1-201 | ENST00000469402 | 321 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC069528.1-201 | ENST00000490344 | 705 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC091976.1-202 | ENST00000509211 | 630 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AL157911.1-202 | ENST00000554123 | 502 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC010928.2-201 | ENST00000588017 | 287 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC122108.2-201 | ENST00000611946 | 526 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | GNAS-AS1_4.1-201 | ENST00000616546 | 112 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MPP6-209 | ENST00000625307 | 126 nt | TSL 5 BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | BX322639.1-202 | ENST00000423987 | 2213 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Y_RNA.72-201 | ENST00000362894 | 103 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RNU6-418P-201 | ENST00000384035 | 107 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR517C-201 | ENST00000385103 | 95 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AL356776.1-201 | ENST00000406574 | 447 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RNU6-174P-201 | ENST00000410406 | 106 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Y_RNA.599-201 | ENST00000410489 | 109 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC074290.1-201 | ENST00000448883 | 135 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC010531.2-201 | ENST00000465012 | 153 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC097473.1-201 | ENST00000508142 | 408 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RNVU1-2-201 | ENST00000516326 | 135 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AP001001.1-201 | ENST00000532422 | 826 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC100763.1-201 | ENST00000532735 | 522 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | LINC01919-202 | ENST00000579506 | 384 nt | TSL 3 BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR4742-201 | ENST00000581069 | 85 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC008749.1-201 | ENST00000597650 | 306 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | KCNQ1OT1_3.1-201 | ENST00000616504 | 116 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC091932.3-201 | ENST00000624223 | 323 nt | BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.94 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR340-201 | ENST00000362125 | 95 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | SNORD115-32-201 | ENST00000364079 | 82 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | RNU6-1305P-201 | ENST00000364353 | 104 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | Y_RNA.269-201 | ENST00000364685 | 89 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MIR487A-201 | ENST00000385009 | 80 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | SNORA67.6-201 | ENST00000391093 | 99 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | NCOR1P3-201 | ENST00000420479 | 303 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | USP9YP30-201 | ENST00000430729 | 455 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | PLCB1-IT1-201 | ENST00000441231 | 373 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | MTCO1P44-201 | ENST00000441935 | 243 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | FGF7P6-202 | ENST00000451282 | 293 nt | BASIC | 1.93 | □□□□□ -2.1 | | |
| CRY2 | Q49AN0 | AC145146.2-202 | ENST00000508118 | 326 nt | TSL 3 BASIC | 1.93 | □□□□□ -2.1 | | |