Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIR5695-201ENST00000579717 85 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 RPL17P51-201ENST00000605218 238 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.24□□□□□ -2.05
USP41Q3LFD5 TCL6_2.1-201ENST00000615162 119 ntBASIC2.24□□□□□ -2.05
USP41Q3LFD5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
USP41Q3LFD5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
USP41Q3LFD5 AL356292.1-201ENST00000283110 373 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 RNU6-873P-201ENST00000363833 107 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 Y_RNA.358-201ENST00000365491 99 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 Y_RNA.364-201ENST00000365532 101 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 RNU6-1026P-201ENST00000384465 108 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 MIR625-201ENST00000385047 85 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 RNU6-159P-201ENST00000391080 106 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 AL357139.1-201ENST00000407792 426 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 HMGN2P38-201ENST00000423806 265 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.23□□□□□ -2.05
USP41Q3LFD5 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 NDUFA5P6-201ENST00000542110 379 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.23□□□□□ -2.05
USP41Q3LFD5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 AL160413.1-201ENST00000622780 310 ntBASIC2.23□□□□□ -2.05
USP41Q3LFD5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USP41Q3LFD5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU1-76P-201ENST00000362903 159 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU6-137P-201ENST00000363680 108 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNY3P11-201ENST00000364153 102 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 Y_RNA.813-201ENST00000364639 102 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU6-438P-201ENST00000365561 103 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 Y_RNA.463-201ENST00000384271 102 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU6-482P-201ENST00000391068 107 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.22□□□□□ -2.05
USP41Q3LFD5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU7-169P-201ENST00000459456 61 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.22□□□□□ -2.05
USP41Q3LFD5 ATP5EP1-201ENST00000510257 156 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 RNU6-1114P-201ENST00000516022 107 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.22□□□□□ -2.05
USP41Q3LFD5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.22□□□□□ -2.05
USP41Q3LFD5 CYP2C61P-201ENST00000604072 290 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.22□□□□□ -2.05
USP41Q3LFD5 AC005296.1-201ENST00000616145 209 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 AC073544.1-201ENST00000600110 1595 ntBASIC2.22□□□□□ -2.05
USP41Q3LFD5 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 MIR369-201ENST00000362155 70 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 SNORA3A-201ENST00000364113 130 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 Y_RNA.428-201ENST00000384078 102 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 Y_RNA.557-201ENST00000384680 107 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 MIR10B-201ENST00000385011 110 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 SNORA69.1-201ENST00000390904 137 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 Y_RNA.605-201ENST00000410577 105 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC004866.1-201ENST00000411748 78 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 RPS20P15-201ENST00000412792 311 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
USP41Q3LFD5 MTND4P28-201ENST00000426217 387 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC099799.1-201ENST00000439809 192 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.21□□□□□ -2.06
USP41Q3LFD5 Y_RNA.638-201ENST00000459374 113 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC093259.1-201ENST00000509755 300 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 RNU7-4P-201ENST00000516961 62 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 SNORD116.3-201ENST00000517176 78 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC022868.1-201ENST00000517767 391 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC233702.2-202ENST00000562547 291 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC009127.3-201ENST00000570531 403 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC090617.3-201ENST00000573670 475 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC026271.5-201ENST00000577873 130 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 SNRPGP17-201ENST00000603780 214 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AL080274.1-201ENST00000605565 220 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 AC090971.5-201ENST00000621102 293 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
USP41Q3LFD5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.21□□□□□ -2.06
USP41Q3LFD5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 SNORD115-3-201ENST00000363100 82 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 Y_RNA.197-201ENST00000364004 102 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 RNU6-280P-201ENST00000364145 104 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 RNU6-245P-201ENST00000384020 107 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U8.13-201ENST00000390842 128 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 RNU2-2P-201ENST00000410396 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC114482.1-201ENST00000418010 247 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC009237.7-201ENST00000447357 229 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AL137159.1-201ENST00000452808 512 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U8.22-201ENST00000459141 133 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.2□□□□□ -2.06
USP41Q3LFD5 AL031274.2-201ENST00000599419 203 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.15-201ENST00000611544 191 ntBASIC2.2□□□□□ -2.06
USP41Q3LFD5 U2.16-201ENST00000613119 191 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms