Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC087884.1-201ENST00000469738 328 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 HMGN1P12-201ENST00000499125 195 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 FAM206BP-201ENST00000510179 541 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.67□□□□□ -2.14
PTCH1Q13635 AC008834.1-201ENST00000511612 175 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 RNU6-113P-201ENST00000516653 101 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.67□□□□□ -2.14
PTCH1Q13635 AC090115.3-201ENST00000553218 849 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AL034555.1-201ENST00000604816 211 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 MIR7974-201ENST00000615835 79 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC022306.2-201ENST00000617563 647 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC022418.1-201ENST00000624118 445 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AC090617.10-201ENST00000624308 134 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
PTCH1Q13635 RNU6-845P-201ENST00000362578 103 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 Y_RNA.100-201ENST00000363141 102 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU1-133P-201ENST00000364867 167 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-142P-201ENST00000384019 107 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 Y_RNA.458-201ENST00000384240 102 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 SNORA48.1-201ENST00000390879 135 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-510P-201ENST00000391239 108 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC022028.1-201ENST00000412054 408 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.66□□□□□ -2.14
PTCH1Q13635 AC005534.2-201ENST00000431047 433 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.66□□□□□ -2.14
PTCH1Q13635 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.66□□□□□ -2.14
PTCH1Q13635 PRPS1P1-201ENST00000445305 876 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC083904.1-201ENST00000487828 231 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC025465.4-201ENST00000513422 638 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-189P-201ENST00000516120 101 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 Y_RNA.665-201ENST00000516177 98 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-1314P-201ENST00000517139 104 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PTCH1Q13635 MIR3198-2-201ENST00000577868 80 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 U2.17-201ENST00000611454 95 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
PTCH1Q13635 RNA5SP493-201ENST00000364115 91 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-767P-201ENST00000384132 107 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 Y_RNA.480-201ENST00000384364 102 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC009161.1-201ENST00000417306 376 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.66□□□□□ -2.14
PTCH1Q13635 NCOR1P3-201ENST00000420479 303 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 MTCO3P46-201ENST00000425787 232 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC098614.3-201ENST00000438957 440 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC145146.1-201ENST00000496370 254 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC091951.2-201ENST00000500762 203 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC008628.2-201ENST00000502605 298 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC046134.1-201ENST00000514454 666 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 SNORA14.1-201ENST00000516113 141 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.66□□□□□ -2.14
PTCH1Q13635 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
PTCH1Q13635 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.66□□□□□ -2.14
PTCH1Q13635 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.66□□□□□ -2.14
PTCH1Q13635 UBE2V2P2-201ENST00000587677 504 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 BNIP3P16-201ENST00000589779 534 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC092747.3-201ENST00000603769 301 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AC104260.1-201ENST00000616660 539 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AL136221.1-201ENST00000621449 509 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 SNORD98-201ENST00000636377 67 ntBASIC1.66□□□□□ -2.14
PTCH1Q13635 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.66□□□□□ -2.14
PTCH1Q13635 RNU6-254P-201ENST00000363377 107 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU6-1141P-201ENST00000364520 107 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 SNORA18.2-201ENST00000383865 132 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU6-26P-201ENST00000383985 107 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 SNORA32.2-201ENST00000384049 122 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 Y_RNA.530-201ENST00000384587 101 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNA5SP219-201ENST00000390940 113 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 EIF4E2P1-201ENST00000393781 255 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
PTCH1Q13635 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 AC244670.1-201ENST00000436879 112 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 AC112492.4-201ENST00000456549 352 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU7-66P-201ENST00000459469 62 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU6-329P-201ENST00000459618 107 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 AC005741.1-201ENST00000511094 432 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU6-875P-201ENST00000516488 106 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNU6-1069P-201ENST00000516612 133 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 RNA5SP476-201ENST00000516613 103 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 Y_RNA.702-201ENST00000516843 96 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 SNORA25.17-201ENST00000517184 124 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 CTHRC1P1-201ENST00000605383 469 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 AC123912.5-201ENST00000605470 343 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
PTCH1Q13635 AC009248.2-201ENST00000619826 254 ntBASIC1.65□□□□□ -2.15
PTCH1Q13635 AC068700.1-201ENST00000565862 3754 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 RNU4-15P-201ENST00000362613 141 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 RNU6-1303P-201ENST00000364841 107 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 RNU5E-4P-201ENST00000364931 120 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 Y_RNA.301-201ENST00000364990 103 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 RNU6-831P-201ENST00000384548 107 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 MIR30A-201ENST00000385092 71 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.64□□□□□ -2.15
PTCH1Q13635 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.64□□□□□ -2.15
PTCH1Q13635 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 Y_RNA.681-201ENST00000516445 113 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.64□□□□□ -2.15
PTCH1Q13635 AC010900.2-201ENST00000604508 210 ntBASIC1.64□□□□□ -2.15
PTCH1Q13635 LARP7P1-201ENST00000605576 316 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 591.5 ms